EY663272

Overview
NameEY663272
Unique NameEY663272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.880e-17
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 2
Query:  173 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF 583
            FW  S G  +     +   F +   EK    +    L GGV+ AVS+T+ AP++R+K+++Q      K+ +++     I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F
Sbjct:  165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGS--KSAKMN-----IYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERF 292          

HSP 2 Score: 44.669 bits (104), Expect = 1.880e-17
Identity = 22/64 (34.38%), Postives = 37/64 (57.81%), Query Frame = 1
Query:  628 SFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +F+Y ++  +TRLA        G   Q++G+ D  KK LK +G+   Y+G+  + +GII Y G+
Sbjct:  304 TFIYPMEVLKTRLA-------VGKTGQYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGI 360          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.880e-17
Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 2
Query:  173 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF 583
            FW  S G  +     +   F +   EK    +    L GG++ AVS+T+ AP++R+K+++Q      K+ +++     I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F
Sbjct:  165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKIMMQVHGS--KSDKMN-----IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERF 292          

HSP 2 Score: 45.0542 bits (105), Expect = 1.880e-17
Identity = 22/64 (34.38%), Postives = 37/64 (57.81%), Query Frame = 1
Query:  628 SFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +F+Y ++  +TRLA        G   Q++G+ D  KK LK +G+   Y+G+  + +GII Y G+
Sbjct:  304 TFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGI 360          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 6.982e-17
Identity = 43/137 (31.39%), Postives = 67/137 (48.91%), Query Frame = 2
Query:  173 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF 583
            FW  S G  +     +   F +   EK    +    L GGV+ AVS+T+ AP++R+K+++Q       N         I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F
Sbjct:  165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKSMN---------IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERF 290          

HSP 2 Score: 43.1282 bits (100), Expect = 6.982e-17
Identity = 23/64 (35.94%), Postives = 37/64 (57.81%), Query Frame = 1
Query:  628 SFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +F+Y ++  +TRLA     AK G   Q++G+    KK LK +G    Y+G+  + +GII Y G+
Sbjct:  302 TFIYPMEVLKTRLA----VAKTG---QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGI 358          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.180e-16
Identity = 39/137 (28.47%), Postives = 67/137 (48.91%), Query Frame = 2
Query:  173 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF 583
            FW  S G  +     +   F +   E+    +    L GG++ AVS+T+ AP++R+K+++Q       N         I   F + +K+ G+ SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F
Sbjct:  165 FWKHSTGIDIGDSLTIPDEFTE--EERKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKVMMQVHGSKSMN---------IFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERF 290          

HSP 2 Score: 43.8986 bits (102), Expect = 1.180e-16
Identity = 22/64 (34.38%), Postives = 36/64 (56.25%), Query Frame = 1
Query:  628 SFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +F+Y ++  +TRLA        G   Q++G+ D  KK LK +G    Y+G+  + +GII Y G+
Sbjct:  302 TFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGI 358          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.419e-16
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  191 GTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRL 541
            GT   L SPV      +   K+  S L   + G ++ AV+KTA AP++R K++ Q     + + R S   K       RT  +EG LSLWRGN+A ++R  P  A+ F   + +K+L
Sbjct:   16 GTHAILPSPVV-----SEGHKNHKSILNSLMSGALAGAVAKTAVAPLDRTKIIFQ-----VSSNRFSA--KEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKL 120          

HSP 2 Score: 40.817 bits (94), Expect = 4.419e-16
Identity = 20/63 (31.75%), Postives = 34/63 (53.97%), Query Frame = 1
Query:  637 YSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYF 825
            Y LD  R R+A   K         ++ +I V+ +  + +G+  LYRGF+ + +G+I Y G+ F
Sbjct:  153 YPLDLVRARMAVTPK-------EMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISF 208          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.109e-15
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  248 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG 568
            EK    +    + GG++ AVS+T  AP++R+K+++Q            H  KG S+      + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+LF  +  + G
Sbjct:  188 EKKTGQWWKQLMAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGSKGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLG 286          

HSP 2 Score: 41.2022 bits (95), Expect = 2.109e-15
Identity = 20/62 (32.26%), Postives = 35/62 (56.45%), Query Frame = 1
Query:  634 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +Y ++  +TRLA        G   Q++G+ D  KK ++ +GI   Y+G+  + +GII Y G+
Sbjct:  305 IYPMEVLKTRLA-------VGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGI 359          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 2.109e-15
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  248 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG 568
            EK    +    L GG++ AVS+T  AP++R+K+++Q            H  KG S+      + VK+ G+ SLWRGN  NVI+  P  A+ F   + +K+LF  +  + G
Sbjct:  188 EKKTGQWWKHLLAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGTKGNSNIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLG 286          

HSP 2 Score: 41.2022 bits (95), Expect = 2.109e-15
Identity = 20/62 (32.26%), Postives = 35/62 (56.45%), Query Frame = 1
Query:  634 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +Y ++  +TRLA        G   Q++G+ D  KK ++ +GI   Y+G+  + +GII Y G+
Sbjct:  305 IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGI 359          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.627e-15
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  248 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG 568
            EK    +    L GG++ AVS+T  AP++R+K+++Q            H  KG ++      + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+LF  +  + G
Sbjct:  188 EKKTGQWWKQLLAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGSKGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLG 286          

HSP 2 Score: 40.4318 bits (93), Expect = 4.627e-15
Identity = 19/62 (30.65%), Postives = 35/62 (56.45%), Query Frame = 1
Query:  634 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +Y ++  +TRLA        G   Q++G+ D  KK ++ +G+   Y+G+  + +GII Y G+
Sbjct:  305 IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGI 359          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 6.012e-15
Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 2
Query:  248 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFN 547
            EK+   +      GGV+ AVS+T  AP++R+K+ +Q      K  ++S     + + F + +K+ G+ SLWRGN  NVI+  P  A+ F   + +K+L +
Sbjct:  189 EKTTGMWWKQLAAGGVAGAVSRTGTAPLDRMKVFMQVHSS--KTNKIS-----LVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLS 281          

HSP 2 Score: 40.4318 bits (93), Expect = 6.012e-15
Identity = 20/62 (32.26%), Postives = 36/62 (58.06%), Query Frame = 1
Query:  634 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGL 819
            +Y ++  +TRL       +K G  Q++G+ D  KK L+ +G+   Y+G+  + +GII Y G+
Sbjct:  307 IYPMEVMKTRLT-----LRKTG--QYSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGI 361          
BLAST of EY663272 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Solute carrier family 25 member 42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 6.074e-15
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  218 VSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRL 541
            + P  + +   K+  S L     G ++ AV+KTA AP++R K++ Q     + + R S   K       RT  ++G LSLWRGN+A ++R  P  A+ F   + +K+L
Sbjct:   20 ILPTPLVSEGHKNHKSVLNSLTSGALAGAVAKTAVAPLDRTKIIFQ-----VSSNRFSA--KEAYRLIYRTYMNDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKL 120          

HSP 2 Score: 40.817 bits (94), Expect = 6.074e-15
Identity = 20/63 (31.75%), Postives = 34/63 (53.97%), Query Frame = 1
Query:  637 YSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYF 825
            Y LD  R R+A   K         ++ +I V+ +  + +G+  LYRGF+ + +G+I Y G+ F
Sbjct:  153 YPLDLVRARMAVTQK-------EMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISF 208          
The following BLAST results are available for this feature:
BLAST of EY663272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
SCMC1_BOVIN1.880e-1731.39Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_HUMAN1.880e-1730.66Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_MOUSE6.982e-1731.39Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_RABIT1.180e-1628.47Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENTR4.419e-1635.04Solute carrier family 25 member 42 OS=Xenopus trop... [more]
SCM1B_XENLA2.109e-1533.64Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM1A_XENLA2.109e-1533.64Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_XENTR4.627e-1533.64Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_DANRE6.012e-1533.00Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENLA6.074e-1532.41Solute carrier family 25 member 42 OS=Xenopus laev... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663272 ID=EY663272; Name=EY663272; organism=Citrus sinensis; type=EST; length=898bp
TTCGTCAACCCACGCGTCCGTCTTCAGCCTCACCATGGCATATGGATCGT
ATCCATCCGTATTTCAGAAAATGCAAGGCCAGTTATACTTCATTTCTGGG
GTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAGGTTCCTTTGT
TAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAGGGAACTGGCC
TGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGCTCCATCAGAA
AAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTTATGGGAGGAGTTTCAGC
AGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTTAAGCTTTTGA
TTCAGAATCAAGATGAGATGATCAAGAATGGTCGGCTCTCGCATCCGTAC
AAGGGGATTTCTGATTGCTTTGCTAGAACTGTTAAGGATGAAGGCATACT
ATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATACTTCCCTACCC
AGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCTGTTTAACTTC
AAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATC
TGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTGTGTATTCGCTTGACTA
TGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAAAAAGGGTGGGG
AAAGGCAGTTTAATGGTTTGATTGATGTCTACAAGAAGACTCTGAAATCT
GATGGCATTGCTGGGCTCTACCGTGGATTCAGCATCTCATGTGTTGGAAT
TATAGTGTATCGTGGGCTCTACTTTGAATGTATGNATCTCTGAAACCCTG
TGGTGTGACTGATGGGATGCANGATATTTTCTGGCTAGCTTCTACTTG
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