EY663252

Overview
NameEY663252
Unique NameEY663252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.070e-30
Identity = 67/167 (40.12%), Postives = 105/167 (62.87%), Query Frame = 3
Query:  333 ALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            A+   + E P++++EDIGGL N  R+++E+V+ P+++P+ F K G+ P +GVL YGPPG GKTLLAKA+A E  A+F+ V G EL+  + GE    VRD+F  A+  +PC++F DE+D++A                 + Q+L EMDG  ++  +    + +RPDI+
Sbjct:  134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDIL 300          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.070e-30
Identity = 67/167 (40.12%), Postives = 105/167 (62.87%), Query Frame = 3
Query:  333 ALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            A+   + E P++++EDIGGL N  R+++E+V+ P+++P+ F K G+ P +GVL YGPPG GKTLLAKA+A E  A+F+ V G EL+  + GE    VRD+F  A+  +PC++F DE+D++A                 + Q+L EMDG  ++  +    + +RPDI+
Sbjct:  134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDIL 300          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 66/167 (39.52%), Postives = 103/167 (61.68%), Query Frame = 3
Query:  333 ALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            A+   + E P++ + DIGGL N  R+++E+V+ P+++P+ F K G+ P +GVL YGPPG GKTLLAKA+A E  A+F+ V G EL+  + GE    VRD+F  A+  +PC++F DE+D++A                 + Q+L EMDG  ++  +    + +RPDI+
Sbjct:  134 AMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDIL 300          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK 788
            K  PS    TV E P+VT+ D+GG      +++E+V+ P+ HP+KF+K G+ P +GVL YGPPG GKTLLA+A+AN   A FI V G EL+  + GE    VR++F  AR+   C++FFDE+D+I  +               + +I+ ++DG  A+
Sbjct:  149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK 788
            K  PS    TV E P+VT+ D+GG      +++E+V+ P+ HP+KF+K G+ P +GVL YGPPG GKTLLA+A+AN   A FI V G EL+  + GE    VR++F  AR+   C++FFDE+D+I  +               + +I+ ++DG  A+
Sbjct:  148 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 304          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK 788
            K  PS    TV E P+VT+ D+GG      +++E+V+ P+ HP+KF+K G+ P +GVL YGPPG GKTLLA+A+AN   A FI V G EL+  + GE    VR++F  AR+   C++FFDE+D+I  +               + +I+ ++DG  A+
Sbjct:  149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK 788
            K  PS    TV E P+VT+ D+GG      +++E+V+ P+ HP+KF+K G+ P +GVL YGPPG GKTLLA+A+AN   A FI V G EL+  + GE    VR++F  AR+   C++FFDE+D+I  +               + +I+ ++DG  A+
Sbjct:  149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.545e-29
Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 3
Query:  315 SKSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            S+     L   V E P+V+++DIGGL    RE++E+V+ P++ P+ F K G++P +GVL YGPPG GKTLLAKA+AN   A FI +  PEL+  + GE    VR++F+ AR  AP ++F DE+D+I                  + Q+L EMDG
Sbjct:  159 SEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDG 312          

HSP 2 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 3
Query:    9 PTRPRFGLSDREIDIGIPDATGRLEILPIHTKNMKLAEDVDLEQIAAETHGHVGADLASLCSEAALQQIRE 221
            P   R G  DR I I +PD  GR EI  IHT++M LAEDVDL+++A  T G  GAD+ ++C+EA +  IRE
Sbjct:  333 PALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIRE 403          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.545e-29
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            K  PS    TV E P+ T+ DIGG      +++E+V+ P+ HP+KF++ G+ P +GVL YGPPG GKTL+A+A+AN   A FI V G EL+  + GE    VR++F  AR+   C+LFFDE+D+I  +               + +IL ++DG  A+  +    + +RPDI+
Sbjct:  186 KIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDIL 357          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.002e-28
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 3
Query:  315 SKSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAKKMFH-HRSHHRPDIM 830
            S   P      V+E   V ++ IGGL    +ELQE V+ P+  P++F + G++P +GVL YG PG GKTLLAKA+A+   A FI V G EL+  + G+    VR+IF+ AR  AP ++F DELDSIA                 + Q+L EMDG   +K      + +RPD++
Sbjct:  139 STEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVL 311          
The following BLAST results are available for this feature:
BLAST of EY663252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
PSMR_METM61.070e-3040.12Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM51.070e-3040.12Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METVS1.183e-2939.52Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7_SPIOL1.183e-2940.7626S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_PRUPE1.183e-2940.7626S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7_ORYSJ1.183e-2940.7626S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7A_ARATH1.183e-2940.7626S protease regulatory subunit 7 homolog A OS=Ara... [more]
PSMR_METKA1.545e-2942.21Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PRS7B_ARATH1.545e-2939.5326S protease regulatory subunit 7 homolog B OS=Ara... [more]
PSMR_METMA1.002e-2839.88Proteasome-activating nucleotidase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663252 ID=EY663252; Name=EY663252; organism=Citrus sinensis; type=EST; length=882bp
TTCGTCGACCCACGCGTCCGCGATTTGGTTTATCTGATCGTGAAATTGAT
ATTGGTATTCCTGATGCCACTGGTCGTCTTGAAATCCTGCCCATTCACAC
GAAAAACATGAAATTAGCTGAAGATGTCGACTTGGAACAGATTGCTGCTG
AGACACATGGTCACGTCGGTGCCGACTTGGCATCTCTTTGCTCCGAAGCA
GCTTTGCAGCAAATTAGAGAAAAAATGGATTTGATTGACTTAGACGATGA
TCAAATTGATGCTGAAGTTTTGAATTCTCTAGCTGTCACAATGGAGAACT
TCAGGTATGCCATGAGCAAGAGCTCGCCCAGCGCTCTTCGTGAAACTGTT
GTTGAAGTTCCCAACGTTACTTGGGAAGACATTGGAGGACTTGCAAATGT
CAAACGTGAACTTCAAGAACTTGTACAGTACCCTGTGGAACATCCAGACA
AATTCTTGAAATTCGGTATGCAACCATCTCGTGGAGTTTTGTTCTACGGA
CCTCCTGGTTGTGGTAAGACCTTGTTAGCCAAAGCAATTGCCAATGAATG
TCAGGCTAATTTTATTTCAGTTAAGGGACCAGAATTGCTCACCATGTGGT
TTGGTGAATCAGAAGCCAACGTCAGAGATATTTTTGATAAGGCTCGTGCA
GCTGCTCCTTGTGTATTATTCTTTGATGAATTAGATTCAATTGCCAAGTC
AAGAGGCGGCAACGTAGGAGATGCAGGTGGAGCTGCAGACCGAGTCATCA
ACCAGATTTTGACAGAGATGGATGGTATGGGAGCAAAAAAGATGTTTCAT
CATAGGAGCCACCATAGACCTGATATTATGATCCTGCATTCTCAGACCGG
ACGTTAGATCAGCTAATTATATTCACTGCCGA
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