EY663252

Overview
NameEY663252
Unique NameEY663252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 3
Query:  315 SKSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAKKMFH-HRSHHRPDIM 830
            S   P      V+E   V ++ IGGL    +ELQE V+ P+  P++F + G++P +GVL YG PG GKTLLAKA+A+   A FI V G EL+  + G+    VR+IF+ AR  AP ++F DELDSIA                 + Q+L EMDG   +K      + +RPD++
Sbjct:  139 STEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVL 311          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 66/163 (40.49%), Postives = 99/163 (60.74%), Query Frame = 3
Query:  348 VVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKS-XXXXXXXXXXXXXXXINQILTEMDGMGAKK-MFHHRSHHRPDIM 830
            + E P VT++D+ G+  VK E++E+++Y ++ P KF K G +P +GVL YG PG GKTLLAKAIA E    FISV G + + M+ G   A VRD+F+ A+  APC++F DE+D++ ++                +NQ+L EMDG      +    + +RPDI+
Sbjct:  146 IEEKPKVTFKDVAGIEEVKEEVKEIIEY-LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDIL 307          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 60/139 (43.17%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  366 VTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMG 782
            VT++D+ G+   K++ QE+VQ+ ++ P+KF   G +  +GVL  GPPG GKTLLAKAIA E    F S+ G E + M+ G   + VRD+FD+A+A+APC++F DE+D++ +                +NQ+LTEMDG G
Sbjct:  218 VTFDDVAGVDEAKQDFQEIVQF-LKFPEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFG 355          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28
Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 3
Query:  327 PSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            PS L   VV+ P + ++ IGGL     EL+E V+ P+  P+ F K G++P +GVL YGPPG GKTLLAKA+AN  +A FI + G EL+  + GE    VR++F+ A+  +P ++F DE+DSI                  + Q+L EMDG   +  +    + +RPDI+
Sbjct:  143 PSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDIL 311          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.108e-27
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 3
Query:  318 KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            K  P      ++E PNVT+ +IGGL    REL+E+V+ P+++P+ F + G++P +GVL YGPPG GKT+LAKA+A E  A FI V   E    + GE    VR++F+ A+  AP ++F DE+D+I                  + Q+L E+DG
Sbjct:  115 KEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDG 267          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.108e-27
Identity = 64/173 (36.99%), Postives = 100/173 (57.80%), Query Frame = 3
Query:  315 SKSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDGMGAK-KMFHHRSHHRPDIM 830
            S+  P      V E P+V++E IGGL    RE++E V+ P++ P+ F K G++P +GVL YGPPG GKTLLAKA+A+E  A FI +   E +  + GE    VR +F+ A+  +P ++F DE+D++A                 + Q+L E+DG  ++  +    + +RPDI+
Sbjct:  131 SEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDIL 303          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.446e-27
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  348 VVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            +V+ P  T+EDIGGL     E++E V+ P+  PD F K G+ P +GVL YGPPG GKTLLAKA+A+E  A F+   G EL+  + GE    VR++FD A+  AP ++F DE+D+I  S               + Q+L  MDG
Sbjct:  144 LVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDG 286          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.446e-27
Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  315 SKSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            S SS S + E   E P+VT+ D+GGL   K+E++E V+ P+   D + + G+ P RGVL YGPPG GKT+L KA+AN  +A FI V G E +  + GE    VRD+F  AR  AP ++F DE+DSIA                 + ++LT+MDG
Sbjct:  154 SDSSISVMGEN--EKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDG 305          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 3
Query:  348 VVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            V E P+VT+ DIGGL +  RE++E V+ P+ +P+KF   G++P  GVL +GPPG GKT+LAKA+AN+  A+FI + G EL+  + GE    VRD+F+ A    P ++F DE+D++A                 + Q+L+EMDG
Sbjct:  143 VDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDG 285          
BLAST of EY663252 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 61/176 (34.66%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  264 EVLNSLAVTMENFRYAMS-----KSSPSALRETVVEVPNVTWEDIGGLANVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSXXXXXXXXXXXXXXXINQILTEMDG 776
            ++   + V  +  +YA+      K  PS     V E P+VT+ D+GG       L+E+V+ P+  P++F+K G+ P +G++ YGPPG GKTL A+A+AN   A FI V G EL+  + GE    VR++F+ AR    C++FFDE+D+I  +               + +++T++DG
Sbjct:  137 DIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 312          
The following BLAST results are available for this feature:
BLAST of EY663252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
PSMR_METAC1.709e-2839.88Proteasome-activating nucleotidase OS=Methanosarci... [more]
FTSH_AQUAE1.709e-2840.49Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH6_ORYSJ1.709e-2843.17Cell division protease ftsH homolog 6, chloroplast... [more]
PSMR_UNCMA2.232e-2839.64Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_SULSO1.108e-2739.87Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_METTH1.108e-2736.99Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_METHJ1.446e-2743.36Proteasome-activating nucleotidase OS=Methanospiri... [more]
PRS6B_YEAST1.446e-2742.8626S protease regulatory subunit 6B homolog OS=Sacc... [more]
PSMR1_HALSA1.889e-2742.66Proteasome-activating nucleotidase 1 OS=Halobacter... [more]
PRS7_SCHPO1.889e-2734.6626S protease regulatory subunit 7 homolog OS=Schiz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663252 ID=EY663252; Name=EY663252; organism=Citrus sinensis; type=EST; length=882bp
TTCGTCGACCCACGCGTCCGCGATTTGGTTTATCTGATCGTGAAATTGAT
ATTGGTATTCCTGATGCCACTGGTCGTCTTGAAATCCTGCCCATTCACAC
GAAAAACATGAAATTAGCTGAAGATGTCGACTTGGAACAGATTGCTGCTG
AGACACATGGTCACGTCGGTGCCGACTTGGCATCTCTTTGCTCCGAAGCA
GCTTTGCAGCAAATTAGAGAAAAAATGGATTTGATTGACTTAGACGATGA
TCAAATTGATGCTGAAGTTTTGAATTCTCTAGCTGTCACAATGGAGAACT
TCAGGTATGCCATGAGCAAGAGCTCGCCCAGCGCTCTTCGTGAAACTGTT
GTTGAAGTTCCCAACGTTACTTGGGAAGACATTGGAGGACTTGCAAATGT
CAAACGTGAACTTCAAGAACTTGTACAGTACCCTGTGGAACATCCAGACA
AATTCTTGAAATTCGGTATGCAACCATCTCGTGGAGTTTTGTTCTACGGA
CCTCCTGGTTGTGGTAAGACCTTGTTAGCCAAAGCAATTGCCAATGAATG
TCAGGCTAATTTTATTTCAGTTAAGGGACCAGAATTGCTCACCATGTGGT
TTGGTGAATCAGAAGCCAACGTCAGAGATATTTTTGATAAGGCTCGTGCA
GCTGCTCCTTGTGTATTATTCTTTGATGAATTAGATTCAATTGCCAAGTC
AAGAGGCGGCAACGTAGGAGATGCAGGTGGAGCTGCAGACCGAGTCATCA
ACCAGATTTTGACAGAGATGGATGGTATGGGAGCAAAAAAGATGTTTCAT
CATAGGAGCCACCATAGACCTGATATTATGATCCTGCATTCTCAGACCGG
ACGTTAGATCAGCTAATTATATTCACTGCCGA
back to top