EY663237

Overview
NameEY663237
Unique NameEY663237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: M3K6_HUMAN (Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  100 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP-------EAVDLFTRLLDPNPDLRPKAQNVLNHPF 558
            TR I+ GL +LH+  ++HRD+K  NVLI+   S   K+SD G SKRL G   C     T  G+  + APE + QG +   +A D++SLGC +    T G+ P+ E     A +   +  ++ V H P       EA     R  +P+P LR  AQ +L  PF
Sbjct:  752 TRQILQGLGYLHDNHIVHRDIKGDNVLIN-TFSGLLKISDFGTSKRLAGITPC---TETFTGTLQYMAPEIIDQGPRGYGKAADIWSLGCTVIEMAT-GRPPFHELGSPQAAMF--QVGMYKV-HPPMPSSLSAEAQAFLLRTFEPDPRLRASAQTLLGDPF 905          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KKCC1_MOUSE (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Mus musculus GN=Camkk1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 49/168 (29.17%), Postives = 87/168 (51.79%), Query Frame = 1
Query:   76 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQT---RAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEA----VDLFTRLLDPNPDLRPKAQNVLNHPF 558
            P  Q     RDI+ GL +LH   ++HRD+KP N+L+  D     K++D G+S + +G+ + L+  A   G+  + APE +    Q+   +A+D+++ G +  +C   GK P+ + +    +  K + +  +    PE      DL  R+LD NP+ R    ++  HP+
Sbjct:  248 PEEQARLYLRDIILGLEYLHCQKIVHRDIKPSNLLLGDDGH--VKIADFGVSNQFEGNDAQLSSTA---GTPAFMAPEAISDSGQSFSGKALDVWATG-VTLYCFVYGKCPFIDDYILTLH-RKIKNEAVVFPEEPEVSEDLKDLILRMLDKNPETRIGVSDIKLHPW 408          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  109 IVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALV 675
            ++  + +LH++G++HRDLKP+N+L  S D+     +SD G+SK ++   S L   +T  G+ G+ APE L Q   ++A+D +S+G I +  + G    Y E+    FE+      +    +  +    A D    L++ +P+ R   +  L HP+    DT L      S   +++   + SK  +A    A+V
Sbjct:  125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVV 313          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  109 IVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALV 675
            ++  + +LH++G++HRDLKP+N+L  S D+     +SD G+SK ++   S L   +T  G+ G+ APE L Q   ++A+D +S+G I +  + G    Y E+    FE+      +    +  +    A D    L++ +P+ R   +  L HP+    DT L      S   +++   + SK  +A    A+V
Sbjct:  125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVV 313          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  109 IVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALV 675
            ++  + +LH++G++HRDLKP+N+L  S D+     +SD G+SK ++   S L   +T  G+ G+ APE L Q   ++A+D +S+G I +  + G    Y E+    FE+      +    +  +    A D    L++ +P+ R   +  L HP+    DT L      S   +++   + SK  +A    A+V
Sbjct:  125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVV 313          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: PLK1_BOVIN (Serine/threonine-protein kinase PLK1 OS=Bos taurus GN=PLK1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  103 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 561
            R IV G  +LH   +IHRDLK  N+ +++D     K+ D G++ +++ D     +  T  G+  + APE L +   +  +D++S+GCI++  +  GK P+  S  ++  +     +  + +HI P A  L  ++L P+P  RP    +LN  FF
Sbjct:  156 RQIVLGCQYLHGNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKETYLRIKNNEYSIPKHINPVASSLIKKMLQPDPTARPTIHELLNDEFF 303          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC2B_RAT (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus GN=Camk2b PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  103 RDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH----IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 591
            + I+  + H H++G++HRDLKP+N+L+ SK K    KL+D G++  +QGD       A   G+ G+ +PE L +    + +D+++ G IL+  + G    + E   +    +K     F         PEA +L  ++L  NP  R  A   L HP+     T  S +
Sbjct:  118 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMM 282          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC2B_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Mus musculus GN=Camk2b PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  103 RDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH----IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 591
            + I+  + H H++G++HRDLKP+N+L+ SK K    KL+D G++  +QGD       A   G+ G+ +PE L +    + +D+++ G IL+  + G    + E   +    +K     F         PEA +L  ++L  NP  R  A   L HP+     T  S +
Sbjct:  118 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMM 282          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC2B_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Homo sapiens GN=CAMK2B PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  103 RDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH----IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 591
            + I+  + H H++G++HRDLKP+N+L+ SK K    KL+D G++  +QGD       A   G+ G+ +PE L +    + +D+++ G IL+  + G    + E   +    +K     F         PEA +L  ++L  NP  R  A   L HP+     T  S +
Sbjct:  118 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMM 282          
BLAST of EY663237 vs. ExPASy Swiss-Prot
Match: KCC2B_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Bos taurus GN=CAMK2B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  103 RDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH----IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 591
            + I+  + H H++G++HRDLKP+N+L+ SK K    KL+D G++  +QGD       A   G+ G+ +PE L +    + +D+++ G IL+  + G    + E   +    +K     F         PEA +L  ++L  NP  R  A   L HP+     T  S +
Sbjct:  118 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIMAHEALKHPWVCQRSTVASMM 282          
The following BLAST results are available for this feature:
BLAST of EY663237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
M3K6_HUMAN7.662e-1336.42Mitogen-activated protein kinase kinase kinase 6 O... [more]
KKCC1_MOUSE7.662e-1329.17Calcium/calmodulin-dependent protein kinase kinase... [more]
KCC1A_RAT7.662e-1328.35Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_MOUSE7.662e-1328.35Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_HUMAN7.662e-1328.35Calcium/calmodulin-dependent protein kinase type 1... [more]
PLK1_BOVIN1.001e-1230.52Serine/threonine-protein kinase PLK1 OS=Bos taurus... [more]
KCC2B_RAT1.001e-1229.76Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2B_MOUSE1.001e-1229.76Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2B_HUMAN1.001e-1229.76Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2B_BOVIN1.001e-1229.76Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-A07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663237 ID=EY663237; Name=EY663237; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGAATTCGATTTCTTCCGGTGATGGAAAACACTAAAGATAT
TGAACTGTGGAAGGCAAATGGGCATCCTTCAGCGCAGTTGTTGAAAGTGA
CAAGAGATATAGTCTCTGGGCTGTCTCATTTACATGAGATTGGATTAATA
CATCGGGACTTGAAGCCTCAAAATGTCTTAATAAGCAAGGATAAAAGTTT
TTGTGCAAAGCTGTCAGATATGGGTATCAGTAAGCGCCTGCAAGGTGACA
TGTCTTGCTTAACCCAGAATGCTACTGGTTATGGGAGTTCAGGTTGGCAA
GCACCTGAGCAGCTCTTACAGGGACGTCAAACACGTGCAATAGATTTGTT
CAGTTTAGGCTGTATTCTCTTTTTTTGTATCACTGGTGGTAAACATCCTT
ATGGAGAGAGTTTTGAGCGTGATGCTAATATTGTGAAAGACCGGAAAGAC
CTGTTCTTGGTGGAGCATATACCAGAAGCAGTGGATCTTTTCACACGTCT
TTTGGATCCTAACCCAGATTTGAGGCCGAAGGCACAGAATGTCTTGAATC
ATCCATTTTTCTGGACTGCTGATACAAGACTCTCATTTCTTCGAGATGTT
AGTGACCGAGTTGAATTGGAAGACAGAGAGAGTGATTCAAAACTCTTGAG
AGCATTAGAAGGTATTGCACTAGTGGCTTTGAATGGGAAATGGGATGAAA
AAGATGGAACTAAATTCATTGAGAACATAGGGCGCTACAGGCGTTAACAA
TATGATAATGTTCGTGACCTATTGCGAGTTATAGAAACAAGTCAATCATT
TCAAGGGACTTCCTCAAGACTCCAAGAATTGTTAAGGTCACATCCTGAAG
GGGTCTACACTACTTTTTCTTGCCGGTC
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