EY744411

Overview
NameEY744411
Unique NameEY744411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            MS  A  RL ++ K  ++D P G    P  N     ++M W   I G   TPW+GG FKL + F +DYP+ PP  +F   +FHPN+Y  G++CL IL+    W P   +  IL  IQ LL +PN   PA +EA  ++ +N+ EY + +R
Sbjct:    1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            MS  A  RL ++ K  ++D P G    P  N     ++M W   I G   TPW+GG FKL + F +DYP+ PP  +F   +FHPN+Y  G++CL IL+    W P   +  IL  IQ LL +PN   PA +EA  ++ +N+ EY + +R
Sbjct:    1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            MS  A  RL ++ K  ++D P G    P  N     ++M W   I G   TPW+GG FKL + F +DYP+ PP  +F   +FHPN+Y  G++CL IL+    W P   +  IL  IQ LL +PN   PA +EA  ++ +N+ EY + +R
Sbjct:    1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            MS  A  RL ++ K  ++D P G    P  N     ++M W   I G   TPW+GG FKL + F +DYP+ PP  +F   +FHPN+Y  G++CL IL+    W P   +  IL  IQ LL +PN   PA +EA  ++ +N+ EY + +R
Sbjct:    1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.440e-25
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            ++ST A KR+ ++   +  DPP   S  P+ ++I  W + I GP  + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP   ++ +L SI SLL D NP  P     A  +  N+ E++R  R
Sbjct:   58 KLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIAR 199          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.440e-25
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            ++ST A KR+ ++   +  DPP   S  P+ ++I  W + I GP  + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP   ++ +L SI SLL D NP  P     A  +  N+ E++R  R
Sbjct:   58 KLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIAR 199          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.440e-25
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            ++ST A KR+ ++   +  DPP   S  P+ ++I  W + I GP  + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP   ++ +L SI SLL D NP  P     A  +  N+ E++R  R
Sbjct:   58 KLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIAR 199          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25
Identity = 54/152 (35.53%), Postives = 96/152 (63.16%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWTA 643
            MS    +R+ ++   +QQD  AGI     ++ I     +  GP+ TP++GG F + ++   DYP +PP + F ++++HPN+ +  G+ICLDIL++QWSP+Y + + L S+QSLLC P P++P +++ A+++ +N +++ R  R      WT+
Sbjct:    1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAR-----EWTS 147          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.207e-25
Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 2
Query:  209 KRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREI 613
            K+ + D +R+  D   G S G   DN I  W  ++ GP DT ++GG FK  L F  DYP KPP ++F+S ++HPNI  +G++C+ IL             + +W P++ V  IL S+ S+L DPN  SPAN +AA+M  EN  E+ +++
Sbjct:    9 KKQLADMRRVPVD---GFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKV 154          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.207e-25
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREI 613
            M++ A   L +  K L + P  G S G   + +I  W+  I GP DT ++GG F   + F ++YPN PPTVRF S ++HPN+Y DG +C+ IL               +W+P++ V +I+ SI S+L  PN  SPAN EAA+ + E + E+ +++
Sbjct:    1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKV 155          
The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC9_MOUSE8.439e-2638.93SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN8.439e-2638.93SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK8.439e-2638.93SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE8.439e-2638.93SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UB2E3_MOUSE1.440e-2539.86Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus... [more]
UB2E3_HUMAN1.440e-2539.86Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens... [more]
UB2E3_BOVIN1.440e-2539.86Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus G... [more]
UBC1_SCHPO2.455e-2535.53Ubiquitin-conjugating enzyme E2 1 OS=Schizosacchar... [more]
UBC7_CAEEL3.207e-2538.93Probable ubiquitin-conjugating enzyme E2 7 OS=Caen... [more]
UBC13_ARATH3.207e-2537.42Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bp
AATTGGGACCGCTGACCTGAACGACTCTCTCTCTCTCTCTCTTTTGTTTC
TCTGATCAAATTGAGTACCATGGAATTCTTTCTCTGATACCGCCTGCTTT
TCGATTGTTTCCCGAGAAAAATCTCGCTGCGATTCTGAAGCTTTTACTGC
AATCAACGCTACTTGCCGCGTCAGCTCGTAGGCAGTGAGAATGTCGACTC
CTGCAAGGAAGAGATTGATGAGGGATTTTAAGAGGTTACAACAAGATCCT
CCGGCTGGCATTAGTGGTGCTCCTCAGGACAACAGTATAATGCTTTGGAA
TGCTGTTATATTCGGGCCGGATGACACCCCATGGGATGGAGGTACGTTTA
AATTGACACTTCAGTTCACAGAGGATTATCCAAATAAGCCACCAACAGTG
CGCTTTGTTTCTCGGATGTTCCATCCAAATATTTATGCGGATGGAAGCAT
TTGCTTGGACATTCTACAAAATCAGTGGAGTCCAATTTACGATGTAGCAG
CAATACTCACGTCAATTCAGTCATTGCTTTGTGACCCAAATCCAAACTCT
CCTGCAAATTCGGAGGCCGCACGGATGTTTACCGAGAACAAGCGTGAATA
CAATAGGGAAATACGGGGAATTGGTGAGCAGAATTGGACTGCTGACTAAT
GGGGAACTTGTTGGAATGGAGGGAACTTCCAAAAAAATCCAATGGGCTGG
TCTAAATAACATTTAAAATTTCAAAGGTGGGGGGGGGGAATACTTGAACT
GGTTTAATCGGTTGTTTCCCCCTTTAAAAGGGAGGATGCTTGGCCCCCTT
ATTTGCTTAATATTTTCACCCTCTTACGGCCAATTGTAACCCCCCCCACA
CAAAACCTGGTCGCAGTCGCTATTTCCATGGCCCGTGTGCGGGCTTTAAA
CAGGACGCCAACACAAAAAA
back to top