EY744411

Overview
NameEY744411
Unique NameEY744411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.541e-22
Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = 2
Query:  212 RLMRDFKRLQQDPPAGISGAPQDNS-IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 577
            RLM+++K LQ +    I   P+D S +  W A+I GP DTP++ G F+L +    +YP +PPT++FV+++FHPNI +  G ICLD+L+  WS IY + ++  SI +LL  P  +SP N +A  +
Sbjct:    4 RLMKEYKVLQNEEFEDILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNL 127          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.319e-22
Identity = 49/146 (33.56%), Postives = 83/146 (56.85%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGE 628
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L   +D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++  R + E
Sbjct:   11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.319e-22
Identity = 47/132 (35.61%), Postives = 78/132 (59.09%), Query Frame = 2
Query:  209 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYN 604
            KR+ R+   L  DPP   S  P+ +++  W A I GP  TP++GG F L + F  DYP KPP + F +R++H N+   G + ++IL++ WSP   +  +L +I+S+   P P SPA    AR++  ++ +++
Sbjct:   39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHD 170          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 49/146 (33.56%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGE 628
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L  ++D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++  R + E
Sbjct:   11 LSPQTIRQVMRELQEMENTPPEGIKVLINESDVTDIQALIDGPAGTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNS-----IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            MS  A  RL  + K  ++D P G    P  N+     +  W   I G  DT W+GG +++ + F +D+P+ PP  +F   +FHPN+Y  G++CL +L     W P   +  +L  IQ LL  PN   PA +EA +++ +N+ EY + ++
Sbjct:    1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 60/158 (37.97%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENK------REYNREIR 616
            ++K L+ + K LQ++P  G      D   +  W   IFGP +T ++GG FK  L+F  DYP  PP  RF+++M+HPNIY  G +C+ IL               +W+P  +V  IL S+ SLL +PN  SPAN +A+ M+ + K      REY   IR
Sbjct:    9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIR 166          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 60/158 (37.97%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENK------REYNREIR 616
            ++K L+ + K LQ++P  G      D   +  W   IFGP +T ++GG FK  L+F  DYP  PP  RF+++M+HPNIY  G +C+ IL               +W+P  +V  IL S+ SLL +PN  SPAN +A+ M+ + K      REY   IR
Sbjct:    9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIR 166          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.661e-22
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  221 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGE 628
            ++   L  DPP GI   P +  +      I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+ A+G IC+++L+  W+    +  +L +I+ LL  PNP S  N EA R+  EN  EY    R + E
Sbjct:   18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.661e-22
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  221 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGE 628
            ++   L  DPP GI   P +  +      I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+ A+G IC+++L+  W+    +  +L +I+ LL  PNP S  N EA R+  EN  EY    R + E
Sbjct:   18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.661e-22
Identity = 50/147 (34.01%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  215 LMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFTENKREYNREIR 616
            L+ +++ L ++P      +  +N++  W+ ++ GP DT ++GG FK  + F  +YP +PP + F S M+HPNIY DG +C+ IL           WSP   +  +L S+ SL  +PN +SPAN +AA+     M  E+   Y  E++
Sbjct:    6 LLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVK 152          
The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBCX_DICDI2.541e-2241.94Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostel... [more]
UBE2S_DROAN3.319e-2233.56Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]
COP10_ARATH3.319e-2235.61Constitutive photomorphogenesis protein 10 OS=Arab... [more]
UBE2S_DROWI4.334e-2233.56Ubiquitin-conjugating enzyme E2 S OS=Drosophila wi... [more]
UBC9_CAEEL4.334e-2233.56SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UB2R1_MOUSE4.334e-2237.97Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus... [more]
UB2R1_HUMAN4.334e-2237.97Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens... [more]
UBE2S_HUMAN5.661e-2236.03Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens ... [more]
UBE2S_BOVIN5.661e-2236.03Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN... [more]
UBC_ASFK55.661e-2234.01Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bp
AATTGGGACCGCTGACCTGAACGACTCTCTCTCTCTCTCTCTTTTGTTTC
TCTGATCAAATTGAGTACCATGGAATTCTTTCTCTGATACCGCCTGCTTT
TCGATTGTTTCCCGAGAAAAATCTCGCTGCGATTCTGAAGCTTTTACTGC
AATCAACGCTACTTGCCGCGTCAGCTCGTAGGCAGTGAGAATGTCGACTC
CTGCAAGGAAGAGATTGATGAGGGATTTTAAGAGGTTACAACAAGATCCT
CCGGCTGGCATTAGTGGTGCTCCTCAGGACAACAGTATAATGCTTTGGAA
TGCTGTTATATTCGGGCCGGATGACACCCCATGGGATGGAGGTACGTTTA
AATTGACACTTCAGTTCACAGAGGATTATCCAAATAAGCCACCAACAGTG
CGCTTTGTTTCTCGGATGTTCCATCCAAATATTTATGCGGATGGAAGCAT
TTGCTTGGACATTCTACAAAATCAGTGGAGTCCAATTTACGATGTAGCAG
CAATACTCACGTCAATTCAGTCATTGCTTTGTGACCCAAATCCAAACTCT
CCTGCAAATTCGGAGGCCGCACGGATGTTTACCGAGAACAAGCGTGAATA
CAATAGGGAAATACGGGGAATTGGTGAGCAGAATTGGACTGCTGACTAAT
GGGGAACTTGTTGGAATGGAGGGAACTTCCAAAAAAATCCAATGGGCTGG
TCTAAATAACATTTAAAATTTCAAAGGTGGGGGGGGGGAATACTTGAACT
GGTTTAATCGGTTGTTTCCCCCTTTAAAAGGGAGGATGCTTGGCCCCCTT
ATTTGCTTAATATTTTCACCCTCTTACGGCCAATTGTAACCCCCCCCACA
CAAAACCTGGTCGCAGTCGCTATTTCCATGGCCCGTGTGCGGGCTTTAAA
CAGGACGCCAACACAAAAAA
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