EY744411

Overview
NameEY744411
Unique NameEY744411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  194 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 529
            S  A KRL +++K +  +PP  I  AP +++I+ W+ VI GP  TP++ G +  TL F  DYP  PP +R ++    PN     +  +CL   D     W+P + V  IL  + S +
Sbjct:    3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMIT----PNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFM 115          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 2
Query:  194 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV--SRMFHPNIYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 529
            S  A KRLM+++  LQ++P   +   P   +I+ W+ +I GP DTP++GG +  TL F  DYP KPP +R +  S  F  N      +CL   D     W+P + V+ IL  + S +
Sbjct:    3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNT----RLCLSFSDFHPKSWNPSWMVSTILVGLVSFM 115          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 529
            A  RL ++F   Q +PP+G      DN +  W   + G   T +   T++L ++F E YP + P V F      HP+IY++G ICLD+L + WSP   +++I  SI S+L
Sbjct:   16 ATNRLQKEFMEWQTNPPSGFKHRVSDN-LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 2
Query:  194 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 529
            S  ++KRL +++K +  +PP  +S  P D +I+ W+ VI GP  TP++ G +   L+F  +YP KPP++  ++    PN     +  +CL   D   + W+P + VA ILT + S +
Sbjct:    3 SRQSQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMIT----PNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFM 115          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 544
            R  T A +RL +D+ R+++DP   I   P  ++I+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:    8 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 544
            R  T A +RL +D+ R+++DP   I   P  ++I+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:    8 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 544
            R  T A +RL +D+ R+++DP   I   P  ++I+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:    8 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 529
            M++   KRL ++   L+ +PP  IS    DN +  W   + G + + + G  FKL  +F+  YP   P V F+     HP+IY++G ICL IL + WSP   V+++  SI S+L
Sbjct:    1 MTSRYAKRLQKELLDLKTNPPPCISITEGDN-LDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSML 113          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  194 STPARKRLMRDFKRLQQDPPAGISGAP----QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV-----SRMFHPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLL--CDPNPNSPA--NSEAARMFTENKREYNREIR 616
            S    +RL ++   L    P   S +      +  + +   +I GP DTP+  G F+  + F +DYP+ PP V        S  F+PN+Y DG +CL IL       + +W+P       +L S+QSL+   +P  N P    S      T++ REY+  IR
Sbjct: 4543 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIR 4704          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 41/134 (30.60%), Postives = 67/134 (50.00%), Query Frame = 2
Query:  209 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKR 595
            KRL ++++ L ++P + +   P  N I+ W+ V+ G + TP+ GG +   ++F  +YP KPP +     M  PN        ICL   D     W+P++ V++ILT + S + D   NSP          E +R
Sbjct:    8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSPTTGSVNTSVAEKQR 134          
The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC6_KLULA4.803e-1334.19Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces... [more]
UBC6_SCHPO6.273e-1335.90Ubiquitin-conjugating enzyme E2 6 OS=Schizosacchar... [more]
UBC17_ARATH6.273e-1336.36Probable ubiquitin carrier protein E2 17 OS=Arabid... [more]
UBC6_DEBHA8.193e-1333.33Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces ... [more]
UB2J2_MOUSE1.825e-1231.45Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus... [more]
UB2J2_HUMAN1.825e-1231.45Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens... [more]
UB2J2_BOVIN1.825e-1231.45Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus G... [more]
UBE2W_DICDI4.066e-1235.96Probable ubiquitin-conjugating enzyme E2 W OS=Dict... [more]
BIRC6_HUMAN1.545e-1130.25Baculoviral IAP repeat-containing protein 6 OS=Hom... [more]
UBC33_ARATH2.018e-1130.60Probable ubiquitin carrier protein E2 33 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bp
AATTGGGACCGCTGACCTGAACGACTCTCTCTCTCTCTCTCTTTTGTTTC
TCTGATCAAATTGAGTACCATGGAATTCTTTCTCTGATACCGCCTGCTTT
TCGATTGTTTCCCGAGAAAAATCTCGCTGCGATTCTGAAGCTTTTACTGC
AATCAACGCTACTTGCCGCGTCAGCTCGTAGGCAGTGAGAATGTCGACTC
CTGCAAGGAAGAGATTGATGAGGGATTTTAAGAGGTTACAACAAGATCCT
CCGGCTGGCATTAGTGGTGCTCCTCAGGACAACAGTATAATGCTTTGGAA
TGCTGTTATATTCGGGCCGGATGACACCCCATGGGATGGAGGTACGTTTA
AATTGACACTTCAGTTCACAGAGGATTATCCAAATAAGCCACCAACAGTG
CGCTTTGTTTCTCGGATGTTCCATCCAAATATTTATGCGGATGGAAGCAT
TTGCTTGGACATTCTACAAAATCAGTGGAGTCCAATTTACGATGTAGCAG
CAATACTCACGTCAATTCAGTCATTGCTTTGTGACCCAAATCCAAACTCT
CCTGCAAATTCGGAGGCCGCACGGATGTTTACCGAGAACAAGCGTGAATA
CAATAGGGAAATACGGGGAATTGGTGAGCAGAATTGGACTGCTGACTAAT
GGGGAACTTGTTGGAATGGAGGGAACTTCCAAAAAAATCCAATGGGCTGG
TCTAAATAACATTTAAAATTTCAAAGGTGGGGGGGGGGAATACTTGAACT
GGTTTAATCGGTTGTTTCCCCCTTTAAAAGGGAGGATGCTTGGCCCCCTT
ATTTGCTTAATATTTTCACCCTCTTACGGCCAATTGTAACCCCCCCCACA
CAAAACCTGGTCGCAGTCGCTATTTCCATGGCCCGTGTGCGGGCTTTAAA
CAGGACGCCAACACAAAAAA
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