EY744411

Overview
NameEY744411
Unique NameEY744411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33
Identity = 65/138 (47.10%), Postives = 88/138 (63.77%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            A KR++++ K LQ+DPP   S  P    +  W A I GP D+P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  +K +Y    R
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR++++ K LQ+DPP   S  P    +  W A I GP ++P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  ++ +Y    R     NWT
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATAR-----NWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR++++ K LQ+DPP   S  P    +  W A I GP D+P+ GG F +T+ F  DYP KPP V F +++FHPN+ ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  ++ +Y    R     +WT
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR-----SWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR++++ K LQ+DPP   S  P    +  W A I GP ++P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  +K +Y    R     +WT
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR-----SWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.709e-32
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR++++ K LQ+DPP   S  P    +  W A I GP D+P+ GG F +++ F  DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  ++ +Y    R     +WT
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR-----SWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.029e-31
Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR++++ K LQ+DPP+  S  P    +  W A I GP ++P+ GG F +++ F  DYP KPP V F ++++HPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   E A M+  ++ +Y    R     +WT
Sbjct:    2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR-----SWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.344e-31
Identity = 62/146 (42.47%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A +R++++ K LQ+DPP   S  P    +  W A I GP+++P+ GG F + + F  DYP KPP V F +++FHPNI ++G+ICLDIL++QWSP   ++ +L SI SLL DPNP+ P   E A ++  +K +Y    R     +WT
Sbjct:    2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMAR-----SWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.995e-31
Identity = 64/146 (43.84%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR+ ++ + LQ+DPP   S  P  + +  W A I GP D+P+ GG F +T+ F  DYP KPP V F ++++HPNI ++GSICLDIL+ QWSP   V+ +L SI SLL DPNP+ P   E A ++  ++ +Y         Q+WT
Sbjct:    2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYEST-----AQSWT 142          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 62/138 (44.93%), Postives = 87/138 (63.04%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616
            A KR+ R+   L +DPP+  S  P  + +  W A I GP D+P+ GG F L++ F  DYP KPP V F +R++HPNI ++GSICLDIL++QWSP   ++ +L SI SLL DPNP+ P   E A ++  ++  Y    R
Sbjct:    2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAR 139          
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.671e-31
Identity = 65/147 (44.22%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  203 ARKRLMRDFKRLQQDPPAGISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIRGIGEQNWT 640
            A KR+ R+ + +Q+ PPA  S  P  +  I  W A I GP D+P+ GG F +++ F+ DYP KPP V F ++++HPNI + GSICLDIL+ QWSP    + +L SI SLL DPNPN P   E A ++  +K +Y         Q WT
Sbjct:    2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYEST-----AQKWT 143          
The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC9_ARATH1.876e-3347.10SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC8_ARATH5.457e-3345.21Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC28_ARATH5.457e-3344.52Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH7.128e-3345.21Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC4_SOLLC2.709e-3244.52Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC11_ARATH1.029e-3143.15Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC29_ARATH1.344e-3142.47Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC30_ARATH2.995e-3143.84Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC4_SCHPO5.108e-3144.93Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]
UBC12_ARATH6.671e-3144.22Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bp
AATTGGGACCGCTGACCTGAACGACTCTCTCTCTCTCTCTCTTTTGTTTC
TCTGATCAAATTGAGTACCATGGAATTCTTTCTCTGATACCGCCTGCTTT
TCGATTGTTTCCCGAGAAAAATCTCGCTGCGATTCTGAAGCTTTTACTGC
AATCAACGCTACTTGCCGCGTCAGCTCGTAGGCAGTGAGAATGTCGACTC
CTGCAAGGAAGAGATTGATGAGGGATTTTAAGAGGTTACAACAAGATCCT
CCGGCTGGCATTAGTGGTGCTCCTCAGGACAACAGTATAATGCTTTGGAA
TGCTGTTATATTCGGGCCGGATGACACCCCATGGGATGGAGGTACGTTTA
AATTGACACTTCAGTTCACAGAGGATTATCCAAATAAGCCACCAACAGTG
CGCTTTGTTTCTCGGATGTTCCATCCAAATATTTATGCGGATGGAAGCAT
TTGCTTGGACATTCTACAAAATCAGTGGAGTCCAATTTACGATGTAGCAG
CAATACTCACGTCAATTCAGTCATTGCTTTGTGACCCAAATCCAAACTCT
CCTGCAAATTCGGAGGCCGCACGGATGTTTACCGAGAACAAGCGTGAATA
CAATAGGGAAATACGGGGAATTGGTGAGCAGAATTGGACTGCTGACTAAT
GGGGAACTTGTTGGAATGGAGGGAACTTCCAAAAAAATCCAATGGGCTGG
TCTAAATAACATTTAAAATTTCAAAGGTGGGGGGGGGGAATACTTGAACT
GGTTTAATCGGTTGTTTCCCCCTTTAAAAGGGAGGATGCTTGGCCCCCTT
ATTTGCTTAATATTTTCACCCTCTTACGGCCAATTGTAACCCCCCCCACA
CAAAACCTGGTCGCAGTCGCTATTTCCATGGCCCGTGTGCGGGCTTTAAA
CAGGACGCCAACACAAAAAA
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