EY663230

Overview
NameEY663230
Unique NameEY663230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHELP (ATP-dependent Clp protease proteolytic subunit OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=clpP PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.988e-30
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +++ LPNSR+MIHQPLGG QG  SDI + A E+L  K  LN  L+ HTGQ LE I  DTDRD FMSA EA +YGL+D V+
Sbjct:  120 KRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVL 199

HSP 2 Score: 57.7658 bits (138), Expect = 3.988e-30
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR
Sbjct:   85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHEPA (ATP-dependent Clp protease proteolytic subunit OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=clpP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.193e-30
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +++ LPNSR+MIHQPLGG QG  SDI + A E+L  K  LN  L+ HTGQ LE I  DTDRD FMSA EA +YGL+D V+
Sbjct:  120 KRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVI 199

HSP 2 Score: 56.225 bits (134), Expect = 5.193e-30
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+P+VSTVC+G AASMGAFLL+ G +GKR
Sbjct:   85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHEHH (ATP-dependent Clp protease proteolytic subunit OS=Shewanella halifaxensis (strain HAW-EB4) GN=clpP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.193e-30
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +++ LPNSR+MIHQPLGG QG  SDI + A E+L  K  LN  L+ HTGQ LE I  DTDRD FMSA EA +YGL+D V+
Sbjct:  120 KRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVI 199

HSP 2 Score: 56.225 bits (134), Expect = 5.193e-30
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+P+VSTVC+G AASMGAFLL+ G +GKR
Sbjct:   85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHEDO (ATP-dependent Clp protease proteolytic subunit OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=clpP PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.193e-30
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +++ LPNSR+MIHQPLGG QG  SDI + A E+L  K  LN  L+ HTGQ LE I  DTDRD FMSA +A DYGL+D ++
Sbjct:  120 KRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLAEHTGQPLEVIERDTDRDNFMSATQAMDYGLVDSLL 199

HSP 2 Score: 57.7658 bits (138), Expect = 5.193e-30
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR
Sbjct:   85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_RHOFD (ATP-dependent Clp protease proteolytic subunit OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=clpP PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.196e-30
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            SLPNS++MIHQP GG+QG  ++I++QA E+L  +  LN  L+  TGQ L +I  DT+RD++MSA E K+YGLID V+
Sbjct:  122 SLPNSKVMIHQPSGGSQGQATEIEIQAREILKTREQLNKILAERTGQPLARIERDTERDYYMSADECKEYGLIDQVI 198

HSP 2 Score: 60.8474 bits (146), Expect = 5.196e-30
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AIFDT+  ++PDVST+C G+AASMGAFLL+AG KGKR
Sbjct:   84 AIFDTMNFVKPDVSTLCTGMAASMGAFLLAAGAKGKR 120
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_NITEU (ATP-dependent Clp protease proteolytic subunit OS=Nitrosomonas europaea GN=clpP PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.755e-30
Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            LPNSR+MIHQPLGG QG  SDI++ A E+L  K+ LN  ++ HTGQT++ I  DTDRD F+ A+ A  YGL+D V+
Sbjct:  131 LPNSRVMIHQPLGGFQGQASDIEIHAKEILALKSRLNEIMAKHTGQTVKAIERDTDRDNFLGAEAAVKYGLVDAVL 206

HSP 2 Score: 61.2326 bits (147), Expect = 6.755e-30
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            A++DTI+ I+PDVST+CVG AASMGAFLL+AG KGKR
Sbjct:   92 AVYDTIQFIKPDVSTLCVGQAASMGAFLLTAGAKGKR 128
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_ERWCT (ATP-dependent Clp protease proteolytic subunit OS=Erwinia carotovora subsp. atroseptica GN=clpP PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.760e-30
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMN 350
            LPNSR+MIHQPLGG QG  +DI++ A E+L  KA +N  ++ HTGQ LE I  DT+RD F+SA EA +YGL+D V  N
Sbjct:  128 LPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVEYGLVDSVFTN 205

HSP 2 Score: 57.3806 bits (137), Expect = 6.760e-30
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR
Sbjct:   89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKR 125
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHISS (ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei (strain Ss046) GN=clpP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.760e-30
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            LPNSR+MIHQPLGG QG  +DI++ A E+L  K  +N  ++ HTGQ+LE+I  DT+RD F+SA EA +YGL+D ++
Sbjct:  128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203

HSP 2 Score: 58.9214 bits (141), Expect = 6.760e-30
Identity = 26/37 (70.27%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR
Sbjct:   89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHIFL (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri GN=clpP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.760e-30
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            LPNSR+MIHQPLGG QG  +DI++ A E+L  K  +N  ++ HTGQ+LE+I  DT+RD F+SA EA +YGL+D ++
Sbjct:  128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203

HSP 2 Score: 58.9214 bits (141), Expect = 6.760e-30
Identity = 26/37 (70.27%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR
Sbjct:   89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_SHIF8 (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri serotype 5b (strain 8401) GN=clpP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.760e-30
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            LPNSR+MIHQPLGG QG  +DI++ A E+L  K  +N  ++ HTGQ+LE+I  DT+RD F+SA EA +YGL+D ++
Sbjct:  128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203

HSP 2 Score: 58.9214 bits (141), Expect = 6.760e-30
Identity = 26/37 (70.27%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR
Sbjct:   89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125
The following BLAST results are available for this feature:
BLAST of EY663230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SHELP3.988e-3060.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHEPA5.193e-3060.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHEHH5.193e-3060.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHEDO5.193e-3058.75ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RHOFD5.196e-3054.55ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NITEU6.755e-3056.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ERWCT6.760e-3057.69ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHISS6.760e-3055.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIFL6.760e-3055.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIF86.760e-3055.26ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663230 ID=EY663230; Name=EY663230; organism=Citrus sinensis; type=EST; length=760bp
GCCATTTTTGATACAATCAGGCACATACAACCGGATGTTTCCACTGTATG
TGTTGGACTGGCAGCCAGTATGGGGGCTTTTCTGCTTAGTGCTGGCACCA
AAGGGAAAAGAACAGTCTTCCAAACTCAAGGATAATGATCCATCAGCCTC
TTGGTGGGGCACAAGGAGGGCAAAGTGATATTGATCTCCAGGCAAATGAG
ATGCTCCATCACAAGGCAAATTTGAATGGGTATCTGTCTTACCATACTGG
TCAAACCCTTGAGAAGATCAACGAGGACACCGATCGCGATTTCTTCATGA
GTGCACAAGAAGCTAAAGACTATGGGCTTATAGATGGTGTCGTCATGAAT
CCGCACAAGATTCTCCAGCCAGTAGCAGCTGCTGCTGGTCAGTGAAAATC
AAGCCAAGTGCGTCAACTTAACTTTGTAACCGTAGCTTTCCCATCCAAAG
GTTTTAGTTTTAGCATTTCTATCAGATACATAGTCCAGTTGGAAAGTTAA
AACACAATGATCAGTAAACCTCTACTGCCTGTTTCATGTACAGATTGGTG
ATTGAATGCTTTTTTAAAACCGTAGGAAAGCCAAAATTATCAACCATTGT
GGGAAATTTCAGTTTTAGGATTCATGTATTGCATGGAATTACATTTTCCC
AATATAATCCATTTTGATGTTGTAAAACCATATGAAGAAATGGCGACACA
AGCTTCATATTGAAATGCTTGAATTGCTCAAAANNAAANCNAANAGGCCC
CAACNAATAA
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