EY663230

Overview
NameEY663230
Unique NameEY663230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:565..1325. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.037e-33
Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVM 347
            +LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+++AK YGLID V++
Sbjct:  137 ALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214

HSP 2 Score: 60.4622 bits (145), Expect = 7.037e-33
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.037e-33
Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVM 347
            +LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+++AK YGLID V++
Sbjct:  137 ALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214

HSP 2 Score: 60.4622 bits (145), Expect = 7.037e-33
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.193e-32
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +LPNSRIMIHQPLGGAQG   +I++QA E+L  K  LN  L+ HTGQ LEKINEDT+RD+F+S  EA +YGLID V+
Sbjct:  141 ALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 217

HSP 2 Score: 57.7658 bits (138), Expect = 1.193e-32
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR
Sbjct:  103 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKR 139
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.194e-32
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVM 347
            +LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+ +AK YGLID V++
Sbjct:  137 ALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLL 214

HSP 2 Score: 60.4622 bits (145), Expect = 1.194e-32
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.194e-32
Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVM 347
            +LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+++AK YGLID V++
Sbjct:  137 ALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214

HSP 2 Score: 60.4622 bits (145), Expect = 1.194e-32
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.558e-32
Identity = 47/80 (58.75%), Postives = 67/80 (83.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ +LP++RIMIHQPLGGAQG  +DI++QA E+L  K  LN  L+ +TGQ+++KI +DT+RDFFMS++EAK+YGLID V+
Sbjct:  112 KRYALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191

HSP 2 Score: 62.3882 bits (150), Expect = 1.558e-32
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT+ +I+PDVST+C+G AASMGAFLLS+GTKGKR
Sbjct:   77 SIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKR 113
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.025e-32
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            LPNSR+MIHQPLGG QG  SDI++ A E+L+ KA LNG L+ HTGQ+LE I+ DTDRD FMSA+++  YGL+D V+
Sbjct:  129 LPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVL 204

HSP 2 Score: 60.077 bits (144), Expect = 2.025e-32
Identity = 27/37 (72.97%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR
Sbjct:   90 AIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKR 126
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.027e-32
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            SLPNSRIMIHQP+GGAQG  SDI +QA E+L  K  LN  L++HTG+ LE+I  DTDRDFFMS +EAK YG++D V+
Sbjct:  114 SLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVI 190

HSP 2 Score: 57.3806 bits (137), Expect = 2.027e-32
Identity = 25/37 (67.57%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+ D++TVC+G AASMGAFLL+AG KGKR
Sbjct:   76 AIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMM (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.029e-32
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +++SL +SRIMIHQPLGGA+G  SDI +QA+E+L  K  LN  L+  TGQ LE+I EDTDRDFFMS  EA  YGL+D V+
Sbjct:  109 KRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPAEAVGYGLVDSVI 188

HSP 2 Score: 63.5438 bits (153), Expect = 2.029e-32
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    4 IFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKRTVFQ 123
            IFDT++H++PDV TVCVGLAASMGAFLL AG  GKR+  Q
Sbjct:   75 IFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQ 114
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.643e-32
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            SLP +RIMIHQPLGG QG  +DID+ A E+L  +  LN  L+ HTGQ  EKI  DT+RDFFMSA EAK+YG+ID V+
Sbjct:  115 SLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191

HSP 2 Score: 62.003 bits (149), Expect = 2.643e-32
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+PDVST+C+G AASMGAFLL+AG KGKR
Sbjct:   77 AIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKR 113
The following BLAST results are available for this feature:
BLAST of EY663230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BURCH7.037e-3361.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCA7.037e-3361.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP4_PROM91.193e-3264.94ATP-dependent Clp protease proteolytic subunit 4 O... [more]
CLPP_BURVG1.194e-3261.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURS31.194e-3261.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NITSB1.558e-3258.75ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THIDA2.025e-3263.16ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESOH2.027e-3264.94ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMM2.029e-3261.25ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP_CARHZ2.643e-3262.34ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663230 ID=EY663230; Name=EY663230; organism=Citrus sinensis; type=EST; length=760bp
GCCATTTTTGATACAATCAGGCACATACAACCGGATGTTTCCACTGTATG
TGTTGGACTGGCAGCCAGTATGGGGGCTTTTCTGCTTAGTGCTGGCACCA
AAGGGAAAAGAACAGTCTTCCAAACTCAAGGATAATGATCCATCAGCCTC
TTGGTGGGGCACAAGGAGGGCAAAGTGATATTGATCTCCAGGCAAATGAG
ATGCTCCATCACAAGGCAAATTTGAATGGGTATCTGTCTTACCATACTGG
TCAAACCCTTGAGAAGATCAACGAGGACACCGATCGCGATTTCTTCATGA
GTGCACAAGAAGCTAAAGACTATGGGCTTATAGATGGTGTCGTCATGAAT
CCGCACAAGATTCTCCAGCCAGTAGCAGCTGCTGCTGGTCAGTGAAAATC
AAGCCAAGTGCGTCAACTTAACTTTGTAACCGTAGCTTTCCCATCCAAAG
GTTTTAGTTTTAGCATTTCTATCAGATACATAGTCCAGTTGGAAAGTTAA
AACACAATGATCAGTAAACCTCTACTGCCTGTTTCATGTACAGATTGGTG
ATTGAATGCTTTTTTAAAACCGTAGGAAAGCCAAAATTATCAACCATTGT
GGGAAATTTCAGTTTTAGGATTCATGTATTGCATGGAATTACATTTTCCC
AATATAATCCATTTTGATGTTGTAAAACCATATGAAGAAATGGCGACACA
AGCTTCATATTGAAATGCTTGAATTGCTCAAAANNAAANCNAANAGGCCC
CAACNAATAA
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