EY663230

Overview
NameEY663230
Unique NameEY663230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:565..1325. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_STAA1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=clpP PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.483e-32
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVM 347
            +LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++A+EAK+YGLID V++
Sbjct:  114 ALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191

HSP 2 Score: 64.3142 bits (155), Expect = 4.483e-32
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR
Sbjct:   76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.837e-32
Identity = 45/79 (56.96%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  117 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNP 353
            LPNSRIM+HQP+GGAQG  +D+++ A E++  K  LN  L++HTGQ +E+I++DTDRDFFMS++EA+ YG+ID V+  P
Sbjct:  115 LPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRP 193

HSP 2 Score: 56.6102 bits (135), Expect = 5.837e-32
Identity = 25/37 (67.57%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+ DVST+CVG+AASMGA LL+AG +GKR
Sbjct:   76 AIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURPS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURP6 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 668) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURP0 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1106a) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURMS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain SAVP1) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURM9 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10229) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURM7 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10247) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.585e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  134 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212

HSP 2 Score: 60.077 bits (144), Expect = 7.585e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 135
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.592e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  124 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202

HSP 2 Score: 60.077 bits (144), Expect = 7.592e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   89 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 125
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_BURMA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.592e-32
Identity = 46/79 (58.23%), Postives = 64/79 (81.01%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            ++ +LPN+R+MIHQPLGGA+G  SDI++QA E+L+ +  LN  L++HTGQ +E+I  DTDRD FMS+++AK YGLID V
Sbjct:  124 KRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202

HSP 2 Score: 60.077 bits (144), Expect = 7.592e-32
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR
Sbjct:   89 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKR 125
The following BLAST results are available for this feature:
BLAST of EY663230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_STAA14.483e-3256.41ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NATTJ5.837e-3256.96ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURPS7.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP67.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP07.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURMS7.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM97.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM77.585e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP17.592e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURMA7.592e-3258.23ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663230 ID=EY663230; Name=EY663230; organism=Citrus sinensis; type=EST; length=760bp
GCCATTTTTGATACAATCAGGCACATACAACCGGATGTTTCCACTGTATG
TGTTGGACTGGCAGCCAGTATGGGGGCTTTTCTGCTTAGTGCTGGCACCA
AAGGGAAAAGAACAGTCTTCCAAACTCAAGGATAATGATCCATCAGCCTC
TTGGTGGGGCACAAGGAGGGCAAAGTGATATTGATCTCCAGGCAAATGAG
ATGCTCCATCACAAGGCAAATTTGAATGGGTATCTGTCTTACCATACTGG
TCAAACCCTTGAGAAGATCAACGAGGACACCGATCGCGATTTCTTCATGA
GTGCACAAGAAGCTAAAGACTATGGGCTTATAGATGGTGTCGTCATGAAT
CCGCACAAGATTCTCCAGCCAGTAGCAGCTGCTGCTGGTCAGTGAAAATC
AAGCCAAGTGCGTCAACTTAACTTTGTAACCGTAGCTTTCCCATCCAAAG
GTTTTAGTTTTAGCATTTCTATCAGATACATAGTCCAGTTGGAAAGTTAA
AACACAATGATCAGTAAACCTCTACTGCCTGTTTCATGTACAGATTGGTG
ATTGAATGCTTTTTTAAAACCGTAGGAAAGCCAAAATTATCAACCATTGT
GGGAAATTTCAGTTTTAGGATTCATGTATTGCATGGAATTACATTTTCCC
AATATAATCCATTTTGATGTTGTAAAACCATATGAAGAAATGGCGACACA
AGCTTCATATTGAAATGCTTGAATTGCTCAAAANNAAANCNAANAGGCCC
CAACNAATAA
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