EY663230

Overview
NameEY663230
Unique NameEY663230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:565..1325. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.678e-31
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGG-AQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNP 353
            +LP+SRIMIHQPLGG AQ   SDI+++A E+L  K  LN  ++  TGQT EKI +DTDRD+F+SA+EAK+YGLID V+ +P
Sbjct:  117 ALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197

HSP 2 Score: 61.2326 bits (147), Expect = 1.678e-31
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++++ D+ T+CVGLAASMGAFLLSAGTKGKR
Sbjct:   79 AIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKR 115
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_PSEPG (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas putida (strain GB-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.842e-31
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGV 341
            +++ LPNSR+MIHQPLGG QG  +DI + A E+L  KA LN  L+YHTGQ LE I  DT+RD FMSA  A +YGLID V
Sbjct:  127 KRHCLPNSRVMIHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSASRAAEYGLIDSV 205

HSP 2 Score: 58.151 bits (139), Expect = 2.842e-31
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            +I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR
Sbjct:   92 SIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKR 128
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) GN=clpP PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.848e-31
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHK 359
            +LPN+ +MIHQPLGGAQG  ++I++ A  +L  +A LN  L+  TGQ++E+I +DTDRD F++A EAK+YGLID  VM P K
Sbjct:  114 ALPNAEVMIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYGLID-EVMQPEK 194

HSP 2 Score: 64.3142 bits (155), Expect = 2.848e-31
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR
Sbjct:   76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.706e-31
Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQ-SDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHK 359
            +LP+SRIMIHQPLGG    Q SDI+++A E+L  K  LN  LS  +GQ+ +KI +DTDRD+F+SA+EAKDYGLID V+ +P++
Sbjct:  117 ALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRVISHPNE 199

HSP 2 Score: 60.4622 bits (145), Expect = 3.706e-31
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI++++ +V T+CVGLAASMGAFLL+AGTKGKR
Sbjct:   79 AIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKR 115
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.706e-31
Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQ-SDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNP 353
            +LP+SRIMIHQPLGG    Q SDI+++A E+L  K  LN  +S  TGQ+ EKI +DTDRD+F+SA+EAK+YGLID V+ +P
Sbjct:  117 ALPHSRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVISHP 197

HSP 2 Score: 62.003 bits (149), Expect = 3.706e-31
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI++++ DV T+CVGLAASMGAFLL AGTKGKR
Sbjct:   79 AIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKR 115
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.709e-31
Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            +LPNS IMIHQPLGGA+G  +DI + A +++  K  LN  LS  TGQ  EKI  DT+RDFFMSA+EAK YG++D V+
Sbjct:  114 ALPNSEIMIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAKAYGIVDEVM 190

HSP 2 Score: 63.1586 bits (152), Expect = 3.709e-31
Identity = 26/37 (70.27%), Postives = 36/37 (97.30%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++++PDVST+C+G+AASMGAFLL+AG KGKR
Sbjct:   76 AIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.824e-31
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ +LPN+RIMIHQPLGGA+G   D+++   E+L  K  LN  LS HTGQ +EKI +DTDRDFFMSA+EAK+YG++D VV
Sbjct:  120 KRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199

HSP 2 Score: 53.5286 bits (127), Expect = 4.824e-31
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+ DVST+CVG AASM A LL+AG KGKR
Sbjct:   85 AIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.824e-31
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ +LPN+RIMIHQPLGGA+G   D+++   E+L  K  LN  LS HTGQ +EKI +DTDRDFFMSA+EAK+YG++D VV
Sbjct:  120 KRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199

HSP 2 Score: 53.5286 bits (127), Expect = 4.824e-31
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+ DVST+CVG AASM A LL+AG KGKR
Sbjct:   85 AIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.824e-31
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ +LPN+RIMIHQPLGGA+G   D+++   E+L  K  LN  LS HTGQ +EKI +DTDRDFFMSA+EAK+YG++D VV
Sbjct:  120 KRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199

HSP 2 Score: 53.5286 bits (127), Expect = 4.824e-31
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT+++I+ DVST+CVG AASM A LL+AG KGKR
Sbjct:   85 AIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKR 121
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.826e-31
Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQ-SDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHK 359
            +LP+SRIMIHQPLGG    Q SDI+++A E+L  K  LN  LS  +GQ+ EKI +DTDRD+F+SA+EAK+YGLID V+ +P++
Sbjct:  117 ALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVISHPNE 199

HSP 2 Score: 60.4622 bits (145), Expect = 4.826e-31
Identity = 27/37 (72.97%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI++++ +V T+CVGLAASMGAFLL+AGTKGKR
Sbjct:   79 AIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKR 115
The following BLAST results are available for this feature:
BLAST of EY663230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_PROMT1.678e-3160.49ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_PSEPG2.842e-3160.76ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STACT2.848e-3154.88ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNPX3.706e-3157.83ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_PROMP3.706e-3159.26ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_CLOTH3.709e-3158.44ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THESQ4.824e-3160.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEP14.824e-3160.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEMA4.824e-3160.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNSC4.826e-3157.83ATP-dependent Clp protease proteolytic subunit 3 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663230 ID=EY663230; Name=EY663230; organism=Citrus sinensis; type=EST; length=760bp
GCCATTTTTGATACAATCAGGCACATACAACCGGATGTTTCCACTGTATG
TGTTGGACTGGCAGCCAGTATGGGGGCTTTTCTGCTTAGTGCTGGCACCA
AAGGGAAAAGAACAGTCTTCCAAACTCAAGGATAATGATCCATCAGCCTC
TTGGTGGGGCACAAGGAGGGCAAAGTGATATTGATCTCCAGGCAAATGAG
ATGCTCCATCACAAGGCAAATTTGAATGGGTATCTGTCTTACCATACTGG
TCAAACCCTTGAGAAGATCAACGAGGACACCGATCGCGATTTCTTCATGA
GTGCACAAGAAGCTAAAGACTATGGGCTTATAGATGGTGTCGTCATGAAT
CCGCACAAGATTCTCCAGCCAGTAGCAGCTGCTGCTGGTCAGTGAAAATC
AAGCCAAGTGCGTCAACTTAACTTTGTAACCGTAGCTTTCCCATCCAAAG
GTTTTAGTTTTAGCATTTCTATCAGATACATAGTCCAGTTGGAAAGTTAA
AACACAATGATCAGTAAACCTCTACTGCCTGTTTCATGTACAGATTGGTG
ATTGAATGCTTTTTTAAAACCGTAGGAAAGCCAAAATTATCAACCATTGT
GGGAAATTTCAGTTTTAGGATTCATGTATTGCATGGAATTACATTTTCCC
AATATAATCCATTTTGATGTTGTAAAACCATATGAAGAAATGGCGACACA
AGCTTCATATTGAAATGCTTGAATTGCTCAAAANNAAANCNAANAGGCCC
CAACNAATAA
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