EY744407

Overview
NameEY744407
Unique NameEY744407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE2_CYATE (UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.416e-27
Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI 436
            L+LL   ++  +VDNL   +  A+  ++EL  +  G L F   DL D  A+ K FS   FD+V+HFA +  VGES   PL YY N    T+VL E MA HG   L++SS+   YG P+++P TEE P +  NPYG+ K + E+I
Sbjct:   21 LQLLLGGFKAVVVDNLDNSSETAIHRVKELAGKFAGNLSFHKLDLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGLPKEVPCTEEFPLSAANPYGRTKLIIEEI 164          

HSP 2 Score: 31.9574 bits (71), Expect = 1.416e-27
Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  471 VMILRYFHVIGSDPEGRLGEPPR 539
            +++LRYF+ +G+ P G +GE PR
Sbjct:  177 IILLRYFNPVGAHPSGYIGEDPR 199          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_DICDI (UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.678e-25
Identity = 55/147 (37.41%), Postives = 88/147 (59.86%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIPGL 448
            + L++  Y   IVDNLS  ++ A+K ++ +  +   ++F + D+ + KA+++ F      +V+HFA +  VGES   PLKYY+N  + TL LL  M +H V  L++SS+   YG+P  +PITE+ P +  NPYG+ K   E I+  L
Sbjct:   23 IELIEAGYTPVIVDNLSNSSLEAIKRVESITGK--EIEFHHVDIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDL 167          

HSP 2 Score: 29.261 bits (64), Expect = 4.678e-25
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  474 MILRYFHVIGSDPEGRLGEPPR 539
            ++LRYF+ +G+ P G +GE P+
Sbjct:  177 IMLRYFNPVGAHPSGLIGEDPK 198          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_NEIMB (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B GN=galE PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.031e-24
Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 2
Query:   14 LLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDII 439
            LLK  ++V I+DNL   +I  +  L+ +  +   + F   D+ D + + + F+ N  D+V+HFA +  VGES  +P+KYY N  S +LVL E MAR GV ++++SS+   YG+P K+P TE+ P     +PYG +K M E I+
Sbjct:   21 LLKSGHQVVILDNLCNSSINILPRLKTITGQ--EIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL 161          

HSP 2 Score: 26.9498 bits (58), Expect = 1.031e-24
Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  468 AVMILRYFHVIGSDPEGRLGEPP 536
            ++++LRYF+ IG+   G +GE P
Sbjct:  172 SMILLRYFNPIGAHESGLIGEQP 194          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_NEIMA (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A GN=galE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.342e-24
Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 2
Query:   14 LLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDII 439
            LLK  ++V I+DNL   +I  +  L+ +  +   + F   D+ D + + + F+ N  D+V+HFA +  VGES  +P+KYY N  S +LVL E MAR GV ++++SS+   YG+P K+P TE+ P     +PYG +K M E I+
Sbjct:   21 LLKSGHQVVILDNLCNSSINILPRLKTITGQ--EIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERIL 161          

HSP 2 Score: 26.9498 bits (58), Expect = 1.342e-24
Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  468 AVMILRYFHVIGSDPEGRLGEPP 536
            ++++LRYF+ IG+   G +GE P
Sbjct:  172 SMILLRYFNPIGAHESGLIGEQP 194          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.746e-24
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2
Query:   44 VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 439
            +D+LS G   A+         P  +  +  D+G A+ +++    +  DAVMHFA    V ES + PL YY N T+++L LL +  R G+D +++SST A YG PE +PI E+ P  PINPYG +K M E ++
Sbjct:   38 IDDLSAGRREAI---------PAAVPLVEGDIGSAELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAGIDKVVFSSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQML 160          

HSP 2 Score: 30.8018 bits (68), Expect = 1.746e-24
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  474 MILRYFHVIGSDPEGRLGE 530
            +ILRYF+V G+DP GR G+
Sbjct:  172 VILRYFNVAGADPAGRTGQ 190          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.747e-24
Identity = 56/143 (39.16%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   14 LLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEE-TPQAPINPYGKAKKMAEDII 439
            LLK  ++V I+DNL   +I  +  L+ +  +   + F   D+ D + + + F+ N  D+V+HFA +  VGES  +P+KYY N  S +LVL E MAR GV  +++SS+   YG+P K+P TE+  P    +PYG +K M E I+
Sbjct:   21 LLKSGHQVVILDNLCNSSINILPRLKTITGQ--EIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERIL 161          

HSP 2 Score: 28.1054 bits (61), Expect = 1.747e-24
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  468 AVMILRYFHVIGSDPEGRLGEPP 536
            +V++LRYF+ IG+   G +GE P
Sbjct:  172 SVILLRYFNPIGAHESGLIGEQP 194          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_BACHD (UDP-glucose 4-epimerase OS=Bacillus halodurans GN=galE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.747e-24
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 430
            L LL+   +V ++DNL +G+ GA+            + F + D+ D + ++  F+ ++ D V+HFAA + VGES   P++YY N    T  LL+ M  H V  +++SST ATYGEP ++PI E  P  P NPYG+ K   E
Sbjct:   18 LFLLEQGEQVIVLDNLQKGHAGALS----------DVTFYHGDIRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVKKIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIE 148          

HSP 2 Score: 30.0314 bits (66), Expect = 1.747e-24
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  480 LRYFHVIGSDPEGRLGE 530
            LRYF+  G+DP GR+GE
Sbjct:  165 LRYFNAAGADPNGRIGE 181          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GAL10_YEAST (Bifunctional protein GAL10 OS=Saccharomyces cerevisiae GN=GAL10 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.945e-24
Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIIPGL 448
            + L+++ Y   + DNLS     +V  L+ L      + F   DL D K + K F     D+V+HFA +  VGEST  PL+YYHN    T+VLLE M ++ V   ++SS+   YG+    P  +PI EE P  P NPYG  K   E+I+  L
Sbjct:   29 VELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDL 177          

HSP 2 Score: 30.0314 bits (66), Expect = 4.945e-24
Identity = 14/35 (40.00%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  432 ISSLDFSKNSNMAVMILRYFHVIGSDPEGRLGEPP 536
            ++ L  S   +    ILRYF+ IG+ P G +GE P
Sbjct:  174 LNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDP 208          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE1_ARATH (UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.515e-24
Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGR-LQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI 436
            ++LLKD ++V+I+DN     I AV  ++EL  P+  + L F   DL +   + K FS   FDAV+HFA +  VGES  +P +Y+ N    T+ L E+MA++    +++SS+   YG+PEK+P  E+     +NPYG+ K   E+I
Sbjct:   24 VQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEI 168          

HSP 2 Score: 28.1054 bits (61), Expect = 6.515e-24
Identity = 9/23 (39.13%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  471 VMILRYFHVIGSDPEGRLGEPPR 539
            +++LRYF+ +G+   G +GE P+
Sbjct:  181 IILLRYFNPVGAHESGSIGEDPK 203          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.103e-23
Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI 436
            ++LL + + V+I+DN     + AV+ ++E+        L+F   DL +   + K FS + FDAV+HFA +  VGES  +P +Y+ N    T+ L E MA+H    +++SS+   YG+PEK+P  E+     +NPYG+ K   E+I
Sbjct:   23 VQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEI 167          

HSP 2 Score: 31.187 bits (69), Expect = 1.103e-23
Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  471 VMILRYFHVIGSDPEGRLGEPPR 539
            +++LRYF+ +G+   G+LGE PR
Sbjct:  180 IVLLRYFNPVGAHESGKLGEDPR 202          
The following BLAST results are available for this feature:
BLAST of EY744407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE2_CYATE1.416e-2742.36UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetrag... [more]
GALE_DICDI4.678e-2537.41UDP-glucose 4-epimerase OS=Dictyostelium discoideu... [more]
GALE_NEIMB1.031e-2439.16UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
GALE_NEIMA1.342e-2439.16UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
EXOB_AZOBR1.746e-2439.39UDP-glucose 4-epimerase OS=Azospirillum brasilense... [more]
GALE_NEIMC1.747e-2439.16UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
GALE_BACHD1.747e-2438.30UDP-glucose 4-epimerase OS=Bacillus halodurans GN=... [more]
GAL10_YEAST4.945e-2438.41Bifunctional protein GAL10 OS=Saccharomyces cerevi... [more]
GALE1_ARATH6.515e-2438.62UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana ... [more]
GALE1_PEA1.103e-2335.86UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744407 ID=EY744407; Name=EY744407; organism=Citrus sinensis; type=EST; length=914bp
TGCTGCATTACGATTACTGAAGGACTCATACCGTGTAACTATAGTTGATA
ATCTTTCACGGGGAAACATAGGTGCCGTAAAGGTCCTACAAGAATTATTT
CCAGAGCCTGGGAGGCTTCAGTTTATTTATGCTGACCTGGGTGATGCTAA
AGCTGTTAACAAATTTTTTTCATAAAATGCATTTGATGCTGTAATGCATT
TTGCAGCTGTTGCTTATGTTGGAGAAAGCACCCTTGATCCTCTCAAATAT
TATCACAACATTACGTCAGATACCTTGGTACTATTGGAGTCAATGGCCAG
ACATGGCGTGGATACTTTGATATATTCCAGTACATGCGCAACATACGGAG
AGCCTGAAAAGATGCCCATTACTGAAGAAACTCCACAGGCTCCAATTAAT
CCATATGGTAAAGCTAAGAAGATGGCAGAAGATATCATCCCTGGACTTCT
CTAAAAATTCAAACATGGCAGTTATGATCCTACGGTACTTTCATGTCATC
GGTTCTGATCCAGAGGGTAGATTAGGGGAACCTCCCAGAACTGAATTGCG
TGACCATGAGGCGATTACCAGGGGCATGTTTTGGAGCCACTTCGGGACTT
ATTGACGGCGCTGAAGGCCCAAGAACAAAACTAACGAACAGCACAAAGGA
CTTAGGATCTCGTGTCTATATTGAAGCTAATGCTCCCGTTTGCAGCTCCT
GGCCTCAACGGCCCGAAAGGGCACCACCACAGGAACCTCAGACAACCACT
ACGAAAACTAGAGCAAAACCGCCGACCCGTAAAGCACCTATATCGAACCG
CCGCAACTCAACCTAGCCTCGACAGACAACGCGCAACACAATGGTCCACC
CCCCCTCCCACAGGGGGGTAGTGTCTCCTCACTTTTGCGCTCCACCCCCA
CACACAGATGCAAG
back to top