EY744407

Overview
NameEY744407
Unique NameEY744407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE1_CYATE (UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.608e-21
Identity = 51/145 (35.17%), Postives = 82/145 (56.55%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI 436
            ++LLK  + V+I+DNL    I AV  ++ L        L F + DL +   ++  FS   FDAV+HFA +  VGES L+P  YY N    T+ L + M++     L+ SS+   YG+P+++P  E++    +NPYG++K   E++
Sbjct:   27 VQLLKQGFHVSIIDNLYNSVIDAVHRVRLLVGPLLSSNLHFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVMSKFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEV 171          

HSP 2 Score: 30.0314 bits (66), Expect = 3.608e-21
Identity = 10/23 (43.48%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  471 VMILRYFHVIGSDPEGRLGEPPR 539
            +++LRYF+ +G+   G++GE PR
Sbjct:  184 IILLRYFNPVGAHESGQIGEDPR 206          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_STRLI (UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.787e-21
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2
Query:    5 ALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*N-AFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIPG 445
            A  L++    V ++ NLS G    V         P    F   D+ D   + K F    +FD V+HFAA + VGES + P KY+ N    T+ LLE+M   GV  L++SST ATYGEPE++PI E  P  P NPYG +K   + +I G
Sbjct:   19 AQHLVEAGNEVVVLHNLSTGFRAGV---------PAGASFYRGDIRDQDFMRKVFRGRLSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVRRLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITG 157          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.022e-21
Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEK----MPITEETPQAPINPYGKAKKMAEDIIPGL 448
            + L+   Y+V IVDNL      AV  ++ +  +   ++F   DL D + + + F       V+HFAA+  VGES   PL+YY N    T+ LL  M  H V T+++SS+   YG+  +    +PI E  P  P NPYGK K   E+II  L
Sbjct:   23 IELINHGYKVIIVDNLCNSCYDAVARVEFIVRKS--IKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDL 171          

HSP 2 Score: 30.4166 bits (67), Expect = 6.022e-21
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  477 ILRYFHVIGSDPEGRLGEPP 536
            ILRYF+ IG+ P G LGE P
Sbjct:  182 ILRYFNPIGAHPSGLLGEDP 201          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: EXOB_RHILT (UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.957e-21
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 439
            L L    YR  + DN S G+   V+       E G       D+ D   +++  + +   A++HFAA+  VGES  DP+ +Y N    TL LL +    G++  ++SSTCATYG P+ +P+ E   Q PINPYG+ K + E  +
Sbjct:   21 LDLANKGYRPVVFDNFSNGHREFVRWGPA---EEG-------DIRDRARLDEVLAKHKPAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVPINPYGRTKYIVEQAL 154          

HSP 2 Score: 32.3426 bits (72), Expect = 7.957e-21
Identity = 12/29 (41.38%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  444 DFSKNSNMAVMILRYFHVIGSDPEGRLGE 530
            D+ +  ++  ++LRYF+  G+D EGR+GE
Sbjct:  156 DYDQYGSLRSVVLRYFNAAGADFEGRIGE 184          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GAL10_PACTA (Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.326e-20
Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEK----MPITEETPQAPINPYGKAKKMAEDII 439
            + L+ + Y V +VDNL   +   +  ++ L  +  ++ F   DL D  A+++ F      AV+HFAA+  VGEST  PL YY N     + LL+ M  + V  +++SS+   YG+  +    +PI E  P  P NPYG+ K   E+II
Sbjct:   19 VELVNNGYNVVVVDNLVNSSYDVIVRIEVLTRK--QIPFFKIDLNDHDALDQVFKLYPIQAVLHFAALKAVGESTKFPLNYYSNNVGGAISLLKVMEENNVKNIVFSSSATVYGDATRFENMIPIPEHCPTGPTNPYGETKITIENII 164          

HSP 2 Score: 30.4166 bits (67), Expect = 1.326e-20
Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  447 FSKNSNMAVMILRYFHVIGSDPEGRLGEPP 536
            ++ + +    ILRYF+ IG+ P G +GE P
Sbjct:  168 YANDKSWKCAILRYFNPIGAHPSGLIGEDP 197          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_MOUSE (UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.275e-20
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAEDIIPGL 448
            L LL+  Y   ++DN     RG     + L+ +    GR ++F   D+ D  A+   F  ++F AV+HFA +  VGES   PL YY    + T+ LLE M  HGV  L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I  L
Sbjct:   19 LELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 170          

HSP 2 Score: 29.261 bits (64), Expect = 2.275e-20
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  474 MILRYFHVIGSDPEGRLGEPPR 539
            ++LRYF+ IG+   GR+GE P+
Sbjct:  180 VLLRYFNPIGAHASGRIGEDPQ 201          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.851e-20
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDIIPGL 448
            ++LL++ + V I+DNL       + V++ L  +     F+  D+ +   + +    +A D V+HFA +  VGES   PL+YY N  + TL L+ +M    V  LI+SS+   YG+  K+P  E  P   P +PYGK+K M E I+  L
Sbjct:   18 VQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL 163          

HSP 2 Score: 30.0314 bits (66), Expect = 3.851e-20
Identity = 10/24 (41.67%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  468 AVMILRYFHVIGSDPEGRLGEPPR 539
            ++ +LRYF+ +G+ P G +GE P+
Sbjct:  171 SIALLRYFNPVGAHPSGDMGEDPQ 194          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 5.009e-20
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDIIPGL 448
            ++LL++ + V I+DNL       + V++ L  +     F+  D+ +   + +    +A D V+HFA +  VGES   PL+YY N  + TL L+ +M    V  LI+SS+   YG+  K+P  E  P   P +PYGK+K M E I+  L
Sbjct:   18 VQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL 163          

HSP 2 Score: 30.0314 bits (66), Expect = 5.009e-20
Identity = 10/24 (41.67%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  468 AVMILRYFHVIGSDPEGRLGEPPR 539
            ++ +LRYF+ +G+ P G +GE P+
Sbjct:  171 SIALLRYFNPVGAHPSGDMGEDPQ 194          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.433e-19
Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDII 439
            L LL+    V I+DNLS  +  ++  +++L  +     F   DL D   +   FS +   AV+HFA +  VG ST  PL+YY N  + TLVLLE M   GV+  I+SS+   YG    +P  E TP     +PYG +K M E I+
Sbjct:   18 LSLLQRGDDVVILDNLSNASRESINRVEKLTGKTAT--FFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQIL 160          

HSP 2 Score: 28.4906 bits (62), Expect = 1.433e-19
Identity = 12/32 (37.50%), Postives = 20/32 (62.50%), Query Frame = 3
Query:  444 DFSK-NSNMAVMILRYFHVIGSDPEGRLGEPP 536
            D++K N     + LRYF+ +G+   G++GE P
Sbjct:  162 DYAKANPEFKTIALRYFNPVGAHESGQMGEDP 193          
BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.864e-19
Identity = 53/146 (36.30%), Postives = 81/146 (55.48%), Query Frame = 2
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDII 439
            ++L++  Y+  I+DNL         VL  +    G    +YA D+ D   ++  F+ +   AV+HFA +  VGES   PL+YY+N    TLVLLE+M    V  LI+SS+   YG+  ++P  E  P  +P +PYG++K M E I+
Sbjct:   18 VQLIEAGYKPVILDNLCNSKSS---VLARIHSLTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVKNLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQIL 160          

HSP 2 Score: 29.6462 bits (65), Expect = 1.864e-19
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  477 ILRYFHVIGSDPEGRLGEPPR 539
            ILRYF+ +G+ P G +GE P+
Sbjct:  174 ILRYFNPVGAHPSGLMGEDPQ 194          
The following BLAST results are available for this feature:
BLAST of EY744407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE1_CYATE3.608e-2135.17UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetrag... [more]
GALE_STRLI4.787e-2139.86UDP-glucose 4-epimerase OS=Streptomyces lividans G... [more]
GAL10_SCHPO6.022e-2136.42Bifunctional protein gal10 OS=Schizosaccharomyces ... [more]
EXOB_RHILT7.957e-2135.42UDP-glucose 4-epimerase OS=Rhizobium leguminosarum... [more]
GAL10_PACTA1.326e-2034.46Bifunctional protein GAL10 OS=Pachysolen tannophil... [more]
GALE_MOUSE2.275e-2036.84UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE... [more]
GALE_SALTI3.851e-2034.46UDP-glucose 4-epimerase OS=Salmonella typhi GN=gal... [more]
GALE_SALTY5.009e-2034.46UDP-glucose 4-epimerase OS=Salmonella typhimurium ... [more]
GALE_ERWAM1.433e-1937.93UDP-glucose 4-epimerase OS=Erwinia amylovora GN=ga... [more]
GALE_YERPE1.864e-1936.30UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744407 ID=EY744407; Name=EY744407; organism=Citrus sinensis; type=EST; length=914bp
TGCTGCATTACGATTACTGAAGGACTCATACCGTGTAACTATAGTTGATA
ATCTTTCACGGGGAAACATAGGTGCCGTAAAGGTCCTACAAGAATTATTT
CCAGAGCCTGGGAGGCTTCAGTTTATTTATGCTGACCTGGGTGATGCTAA
AGCTGTTAACAAATTTTTTTCATAAAATGCATTTGATGCTGTAATGCATT
TTGCAGCTGTTGCTTATGTTGGAGAAAGCACCCTTGATCCTCTCAAATAT
TATCACAACATTACGTCAGATACCTTGGTACTATTGGAGTCAATGGCCAG
ACATGGCGTGGATACTTTGATATATTCCAGTACATGCGCAACATACGGAG
AGCCTGAAAAGATGCCCATTACTGAAGAAACTCCACAGGCTCCAATTAAT
CCATATGGTAAAGCTAAGAAGATGGCAGAAGATATCATCCCTGGACTTCT
CTAAAAATTCAAACATGGCAGTTATGATCCTACGGTACTTTCATGTCATC
GGTTCTGATCCAGAGGGTAGATTAGGGGAACCTCCCAGAACTGAATTGCG
TGACCATGAGGCGATTACCAGGGGCATGTTTTGGAGCCACTTCGGGACTT
ATTGACGGCGCTGAAGGCCCAAGAACAAAACTAACGAACAGCACAAAGGA
CTTAGGATCTCGTGTCTATATTGAAGCTAATGCTCCCGTTTGCAGCTCCT
GGCCTCAACGGCCCGAAAGGGCACCACCACAGGAACCTCAGACAACCACT
ACGAAAACTAGAGCAAAACCGCCGACCCGTAAAGCACCTATATCGAACCG
CCGCAACTCAACCTAGCCTCGACAGACAACGCGCAACACAATGGTCCACC
CCCCCTCCCACAGGGGGGTAGTGTCTCCTCACTTTTGCGCTCCACCCCCA
CACACAGATGCAAG
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