EY744407

Overview
NameEY744407
Unique NameEY744407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744407 vs. ExPASy Swiss-Prot
Match: GALE_KLEPN (UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.110e-12
Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 2 
Query:    8 LRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS*NAFDAVMHFAAVAYVGESTLDPLKYYHNITSDTLVLLESMARHGVDTLIYSSTCATYGEPEKMPITE 376
            ++LL+  + V I+DNL       + V++ L  +     FI  D+ +   + +    +A +AV+HFA +  VGES   PL+YY N  + TL L+ +M   GV   I+SS+   YG+  K+P  E
Sbjct:   18 VQLLQRGHEVVILDNLCNSKRRILPVIERLGGKEAT--FIEGDIRNEARMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYDNNVTGTLKLVSAMRAAGVKNFIFSSSATVYGDQPKIPYVE 138
The following BLAST results are available for this feature:
BLAST of EY744407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE_KLEPN3.110e-1233.33UDP-glucose 4-epimerase (Fragment) OS=Klebsiella p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744407 ID=EY744407; Name=EY744407; organism=Citrus sinensis; type=EST; length=914bp
TGCTGCATTACGATTACTGAAGGACTCATACCGTGTAACTATAGTTGATA
ATCTTTCACGGGGAAACATAGGTGCCGTAAAGGTCCTACAAGAATTATTT
CCAGAGCCTGGGAGGCTTCAGTTTATTTATGCTGACCTGGGTGATGCTAA
AGCTGTTAACAAATTTTTTTCATAAAATGCATTTGATGCTGTAATGCATT
TTGCAGCTGTTGCTTATGTTGGAGAAAGCACCCTTGATCCTCTCAAATAT
TATCACAACATTACGTCAGATACCTTGGTACTATTGGAGTCAATGGCCAG
ACATGGCGTGGATACTTTGATATATTCCAGTACATGCGCAACATACGGAG
AGCCTGAAAAGATGCCCATTACTGAAGAAACTCCACAGGCTCCAATTAAT
CCATATGGTAAAGCTAAGAAGATGGCAGAAGATATCATCCCTGGACTTCT
CTAAAAATTCAAACATGGCAGTTATGATCCTACGGTACTTTCATGTCATC
GGTTCTGATCCAGAGGGTAGATTAGGGGAACCTCCCAGAACTGAATTGCG
TGACCATGAGGCGATTACCAGGGGCATGTTTTGGAGCCACTTCGGGACTT
ATTGACGGCGCTGAAGGCCCAAGAACAAAACTAACGAACAGCACAAAGGA
CTTAGGATCTCGTGTCTATATTGAAGCTAATGCTCCCGTTTGCAGCTCCT
GGCCTCAACGGCCCGAAAGGGCACCACCACAGGAACCTCAGACAACCACT
ACGAAAACTAGAGCAAAACCGCCGACCCGTAAAGCACCTATATCGAACCG
CCGCAACTCAACCTAGCCTCGACAGACAACGCGCAACACAATGGTCCACC
CCCCCTCCCACAGGGGGGTAGTGTCTCCTCACTTTTGCGCTCCACCCCCA
CACACAGATGCAAG
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