EY744393

Overview
NameEY744393
Unique NameEY744393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 63/159 (39.62%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D + I   S H+W+D CSL +  DGLID    ST IT+S  Y + H+K ML+G   S+  D+ ++VTI    F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A       E    + A + + K    RSEGD+FL GA
Sbjct:  206 DGDAVSIFGGS-HVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGA 363          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DG+ I   S H+W+D CS  + +DGLID    ST IT+S  + T HDK ML+G   ++  D+ ++VTI    F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A   + + E    + A + E K    RS GD+ L GA
Sbjct:  206 DGDGVSIFGGS-HVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGA 363          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 65/166 (39.16%), Postives = 87/166 (52.41%), Query Frame = 2
Query:    8 RGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSG----LIRSEGDIFLKGA 490
            +G D D I I  +S +IWID C L    DGLID+   ST IT+S  YFTQHDK ML+G +   V D  ++VT+    F  G  +R PR+R G  H+ NN    W +YA+  S +  I+S+ N + A  K  +      K   K E K G      R+  D+F  GA
Sbjct:  189 KGSDGDAIAIFGSS-NIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNS------KEVTKREVKGGWNNWRWRTSKDVFKNGA 347          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 64/166 (38.55%), Postives = 88/166 (53.01%), Query Frame = 2
Query:    8 RGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSG----LIRSEGDIFLKGA 490
            +G D D I I  +S ++WID C L    DGLID+   ST IT+S  YFTQHDK ML+G + + V D  ++VT+    F  G  +R PR+R G  H+ NN    W +YA+  S +  I+S+ N + A  K  +      K   K E K G      R+  D+F  GA
Sbjct:  189 KGSDGDAITIFGSS-NVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYS------KEVTKREVKGGWNNWRWRTSNDVFKNGA 347          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.207e-20
Identity = 64/159 (40.25%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D I I  +S HIWID  SL +  DGL+D    ST ITVS  +FT H++ ML+G   S+  D+ ++VTI +  F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A       E    +   + + K    RSEGD+FL GA
Sbjct:  214 DGDAISIFGSS-HIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGA 371          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 64/159 (40.25%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I  +S HIWID  SL    DGLID    ST IT+S  Y T H++ +L+G   S+  D+ ++VTI +  F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A   +   E      A K E  +   RS+GD+ L GA
Sbjct:  216 DGDGISIFGSS-HIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGA 373          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D I +  +S+ IWID CSL    DGL+D+T  ST +T+S C FTQ  K +L+GAD +HV D+ +  T+   +F D   QR PR RFG   + NN    WG YA+  S    I  Q N + A   +              E+ +   RS+ D+   GA
Sbjct:  194 DGDTINVAGSSQ-IWIDHCSLSKSFDGLVDVTLGSTHVTISNCKFTQQSKAILLGADDTHVQDKGMLATVAFNMFTDNVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILCQGNRFLAPDDQIKKNVLARTGTGAAESMAWNWRSDKDLLENGA 351          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.088e-19
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 2
Query:    2 GGRGH-DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEK-AADKLEAKSGLIRSEGDIFLKGA 490
            G RG  D DGI I   + +IW+D  S+    DGLID    ST IT+S  +FT H+  ML+GA  +++ D+ ++VT+ +  F  G  QR PR+R+G VH+ NN   +W +YA+  S    I S  N + A   K+ +   T++  A + E K+   RSE D+F+  A
Sbjct:  265 GHRGEADGDGISIF-GATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRSEKDVFMNNA 429          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.088e-19
Identity = 60/159 (37.74%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D I +  +S+ IWID CSL    DGL+DIT  S+ +TVS C FTQH   +L+GAD +H  D+ +  T+   +F D   QR PR RFG   + NN    WG YA+  S    I SQ N + A                  E+ S   R++ D+   GA
Sbjct:  195 DGDAINVAGSSQ-IWIDHCSLSKASDGLLDITLGSSHVTVSNCKFTQHQFVLLLGADDTHYQDKGMLATVAFNMFTDHVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILSQGNRFFAPDDIIKKNVLARTGTGNAESMSWNWRTDRDLLENGA 352          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.727e-19
Identity = 64/160 (40.00%), Postives = 82/160 (51.25%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTE-KAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I   S+ IW+D CS+    DGLID    ST IT+S  YFT HD+ ML+G D ++  D  ++VTI    F  G  QR PR R G +H+ NN    W +YA+  S    I SQ N Y A       E      + D  E  +   R+EGD+   GA
Sbjct:  217 DGDGISIF-GSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLMENGA 375          
The following BLAST results are available for this feature:
BLAST of EY744393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PEL5_ARATH1.888e-2039.62Probable pectate lyase 5 OS=Arabidopsis thaliana G... [more]
PEL18_ARATH1.888e-2038.99Probable pectate lyase 18 OS=Arabidopsis thaliana ... [more]
PEL16_ARATH1.888e-2039.16Probable pectate lyase 16 OS=Arabidopsis thaliana ... [more]
PEL17_ARATH2.466e-2038.55Putative pectate lyase 17 OS=Arabidopsis thaliana ... [more]
PEL8_ARATH4.207e-2040.25Probable pectate lyase 8 OS=Arabidopsis thaliana G... [more]
PEL14_ARATH9.372e-2040.25Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
MPA13_AMBAR1.224e-1937.11Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
PEL7_ARATH2.088e-1937.95Probable pectate lyase 7 OS=Arabidopsis thaliana G... [more]
MPA12_AMBAR2.088e-1937.74Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifol... [more]
PEL13_ARATH2.727e-1940.00Probable pectate lyase 13 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744393 ID=EY744393; Name=EY744393; organism=Citrus sinensis; type=EST; length=940bp
AGGTGGTAGAGGACATGATGTTGATGGCATTCAAATTAAGCCGAATTCTA
GGCACATATGGATAGATCGGTGCAGCCTTCGTGATTATGATGATGGACTT
ATTGACATTACCAGGCAAAGCACAGATATTACTGTTTCTAGATGTTACTT
CACACAACATGACAAGACAATGCTTATTGGAGCAGACCCTTCTCATGTCG
GAGATAGATGCATCCGAGTTACCATTCACCATTGTCTTTTTGATGGGACA
CGCCAAAGACATCCACGCCTTAGATTTGGGAAGGTTCACCTGTACAATAA
TTACACTAGGAACTGGGGCATTTATGCTGTTTGTGCAAGTGTGGAATCCC
AGATATACTCCCAATGCAATATATATGAAGCAGGACAAAAGAAAAGGACT
TTTGAATATTATACAGAGAAGGCAGCGGACAAGCTTGAGGCAAAGTCTGG
CTTGATACGATCAGAAGGAGACATATTCCTGAAAGGAGCACAAGCACAAT
TATTGACAGGGGTAGGGGAAGAATGTGTATTCCATCCGAGTGAATACTAT
CCAACGTGGACTATGGAAGCACCCTCAGACTCTCTTAAACAAATTCTCCA
AATCTGTACAGGCTGGCAATCGATTCCTAGACCAGCAGATGTGATGATAG
CTAATTACCTTTTCAATATCTTCATTGTGCCCCCTGCATGCATGATGAAT
AATATATGTCCCTGCTTTGGTGCTTTTATTTTTCCCCCAGAAAAAGGGGG
AAAAAAAAAAAAAAAAAATTTGGAATTTCCAGGGGTTAAATTGGGGTTGC
CCCCTTTGGGGTAAAAAAAATTCCTTTCCCTTGGGCCCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGGGGGGGCCCCCCCCAAAAAAGGAAAACAC
AATCTTTAATGATACCCGGGGGGGTGGGGGAAAGATATTA
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