EY744393

Overview
NameEY744393
Unique NameEY744393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.651e-19
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D I I  +S HIWID  SL +  DGL+D+   ST IT+S  +FT HD+ ML+G + S+  D+ ++VT+ +  F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A +     E          E      RSE D+ + GA
Sbjct:  250 DGDAINIFGSS-HIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGA 407          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.934e-19
Identity = 70/168 (41.67%), Postives = 89/168 (52.98%), Query Frame = 2
Query:    2 GGRGHDV-DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLFDGTR--QRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEY-YTEKAADKLEA-KSGLIRSEGDIFLKGA 490
            G RG D  D I I  NS  IWID  S+    DGLID    ST+IT+S C+FT H+K ML GA+     DR +++T+ +  F G R  QR PR RFG  HL NN   +W  YA+  S  + I SQ N + A  K    E  Y EK+   +E        ++GD F  GA
Sbjct:  187 GLRGADEGDAISIF-NSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNHF-GKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGA 352          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 70/168 (41.67%), Postives = 90/168 (53.57%), Query Frame = 2
Query:    2 GGRGHDV-DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLFDGTR--QRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEY-YTEK-AADKLEAKSGLIRSEGDIFLKGA 490
            G RG D  DGI I  +S  IWID  S+    DGLID    ST+IT+S C+FT H+K ML GA+  +V D+ +++T+ +  F G R  QR PR RFG  HL NN   +W  YA+  S  + I SQ N + A  +    E  Y EK  A   E       S+GD    GA
Sbjct:  186 GLRGSDEGDGISIF-SSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVMLFGANDHYVLDKDMKITLAYNHF-GKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGA 351          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 59/159 (37.11%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I   + ++WID  S+ D  DG+ID    ST IT+S  +FT HD+ ML G     V D+ +++T+    F    +QR PR+RFG VH+ NN   +W +YA+  ++   I SQ N + A   + + +    +     E KS   +SE D FL GA
Sbjct:  247 DGDGINIF-GATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDKKMQITVAFNHFGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPIEDSKQVTKREYTPYPEWKSWNWQSEKDYFLNGA 404          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEK-AADKLEAKSGLIRSEGDIFLKGA 490
            D DG+ I  +S +IW+D  S+    DGLID    ST IT+S  +FT H+  ML+GA  ++  D+ ++VT+ +  F  G  QR PR+R+G VH+ NN   +W +YA+  S    I S  N + A   K  +   T++  A + E K    RS+ D+F+ GA
Sbjct:  268 DGDGLSIYGSS-NIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASEDEWKHWNWRSDKDVFMNGA 426          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 59/160 (36.88%), Postives = 86/160 (53.75%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLFDGTR--QRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI +   + +IWID  S+    DG+ID    ST +T+S  +FT H + ML GA   HV D+ +++T+    F G R  QR PR R+G +H+ NN   +W +YA+  ++   I SQ N + A   +   +    +     E KS   +SEGD FL GA
Sbjct:  251 DGDGISLF-GATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGARDEHVIDKKMQITVAFNHF-GKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAKQITKREYTPYGEWKSWNWQSEGDYFLNGA 408          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 63/159 (39.62%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D I I  +S HIWID  SL +  DGLID    ST IT+S  Y T H++ ML+G   S+  D+ ++VTI +  F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A       E      + + E K    RS+GD+ L GA
Sbjct:  238 DGDAISIFGSS-HIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGA 395          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.717e-18
Identity = 63/161 (39.13%), Postives = 83/161 (51.55%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLFD-GTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEA--KSGLIRSEGDIFLKGA 490
            D D I I  +S H+WID  SL    DGL+D    ST IT+S  + T H++ ML+G   S++ D+ ++VTI +  F  G  QR PR R G  H+ NN   +W +YA+  S    I SQ N Y A   K  F     K  D   +  K    RSEGD+   GA
Sbjct:  227 DGDAISIFGSS-HVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAA--PKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGA 384          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.717e-18
Identity = 61/180 (33.89%), Postives = 89/180 (49.44%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLI-RSEGDIFLKGAQAQLLTGVGEECVFHPSEYY 550
            D D I ++ N  + WID  SL D  DGLID+T  ST IT+S  +F  H K ML+G D ++  D+ ++VT+    F     QR PR R+G VH+ NN    W IYA+  S    I S+ N + A  +    E       +   A +  + RS  D F  GA       + E  +++ +E +
Sbjct:  170 DGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPNENYKKEVTKRIGCESTSACANWVWRSTRDAFSNGAYFVSSGKIEETNIYNSNEAF 348          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.717e-18
Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLI-RSEGDIFLKGA 490
            D D I ++ N  + WID  SL D  DGLID+T  ST IT+S  +F  H K ML+G D ++  D+ ++VT+    F     QR PR R+G VH+ NN    W IYA+  S    I S+ N + A  +    E       +   A +  + RS  D F+ GA
Sbjct:  170 DGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGA 328          
The following BLAST results are available for this feature:
BLAST of EY744393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PEL9_ARATH4.651e-1937.74Probable pectate lyase 9 OS=Arabidopsis thaliana G... [more]
PEL56_SOLLC7.934e-1941.67Probable pectate lyase P56 OS=Solanum lycopersicum... [more]
PEL_TOBAC1.353e-1841.67Pectate lyase OS=Nicotiana tabacum PE=2 SV=1[more]
PEL6_ARATH1.353e-1837.11Probable pectate lyase 6 OS=Arabidopsis thaliana G... [more]
PEL19_ARATH1.353e-1837.50Putative pectate lyase 19 OS=Arabidopsis thaliana ... [more]
PEL3_ARATH1.768e-1836.88Probable pectate lyase 3 OS=Arabidopsis thaliana G... [more]
PEL10_ARATH1.768e-1839.62Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]
PEL1_ARATH6.717e-1839.13Probable pectate lyase 1 OS=Arabidopsis thaliana G... [more]
MPAJ1_JUNVI6.717e-1833.89Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]
MPAJ1_JUNAS6.717e-1836.88Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744393 ID=EY744393; Name=EY744393; organism=Citrus sinensis; type=EST; length=940bp
AGGTGGTAGAGGACATGATGTTGATGGCATTCAAATTAAGCCGAATTCTA
GGCACATATGGATAGATCGGTGCAGCCTTCGTGATTATGATGATGGACTT
ATTGACATTACCAGGCAAAGCACAGATATTACTGTTTCTAGATGTTACTT
CACACAACATGACAAGACAATGCTTATTGGAGCAGACCCTTCTCATGTCG
GAGATAGATGCATCCGAGTTACCATTCACCATTGTCTTTTTGATGGGACA
CGCCAAAGACATCCACGCCTTAGATTTGGGAAGGTTCACCTGTACAATAA
TTACACTAGGAACTGGGGCATTTATGCTGTTTGTGCAAGTGTGGAATCCC
AGATATACTCCCAATGCAATATATATGAAGCAGGACAAAAGAAAAGGACT
TTTGAATATTATACAGAGAAGGCAGCGGACAAGCTTGAGGCAAAGTCTGG
CTTGATACGATCAGAAGGAGACATATTCCTGAAAGGAGCACAAGCACAAT
TATTGACAGGGGTAGGGGAAGAATGTGTATTCCATCCGAGTGAATACTAT
CCAACGTGGACTATGGAAGCACCCTCAGACTCTCTTAAACAAATTCTCCA
AATCTGTACAGGCTGGCAATCGATTCCTAGACCAGCAGATGTGATGATAG
CTAATTACCTTTTCAATATCTTCATTGTGCCCCCTGCATGCATGATGAAT
AATATATGTCCCTGCTTTGGTGCTTTTATTTTTCCCCCAGAAAAAGGGGG
AAAAAAAAAAAAAAAAAATTTGGAATTTCCAGGGGTTAAATTGGGGTTGC
CCCCTTTGGGGTAAAAAAAATTCCTTTCCCTTGGGCCCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGGGGGGGCCCCCCCCAAAAAAGGAAAACAC
AATCTTTAATGATACCCGGGGGGGTGGGGGAAAGATATTA
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