EY744375

Overview
NameEY744375
Unique NameEY744375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744375 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.114e-25
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  156 IQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDR--EQRIYLWFDPTKAYHFYSVLWNMXXRVFFVDEIPITVFKNCKDLGVRFPFNQPMKYTPSPVEGR*LATQNGGLEKTNLPQAPFFA 653
            ++L LD+YTG+GF S   Y  G +S  +KL    +AG V AFY S+ +     HDE+D EFLGN  G+P+  QTN++  G   R  E+R  LWFDP+K +H YS+LW     +F+VD++PI        +G  +P  +PM    +  +    AT +GG  K N   APF A
Sbjct:   54 VRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYP-AKPMALYATIWDASDWAT-SGGKYKANYKFAPFVA 222          
BLAST of EY744375 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.241e-25
Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 3
Query:  156 IQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDR--EQRIYLWFDPTKAYHFYSVLWNMXXRVFFVDEIPITVFKNCKDLGVRFPFNQPMKYTPSPVEGR*LATQNG--GLEKTNLP 635
            ++L LDKYTG+GF S   Y  G FS  +KL    +AG V AFY S+ +    +HDE+D EFLGN  G+P+  QTN++  G  +R  E+R  LWFDP+K +H YS+LW     +F+VD++PI      +++   +P  +PM    +  +    AT  G  G++ T  P
Sbjct:   62 VRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYP-QKPMSLYATIWDASSWATSGGKFGVDYTFSP 227          
BLAST of EY744375 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 56/199 (28.14%), Postives = 88/199 (44.22%), Query Frame = 3
Query:   24 LGILFMVSATMGVPPRKPV-------------------------NVPFGRNYMPTWAFDHIKYFNGGSEIQLHLDK--YTGTGFQSKGSYLFGHFSMQMKLVPGDSAGSVTAFYL---SSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHFYSVLWNMXXRVFFVDEIPI-TVFKNCKD 527
            L +L ++S TM  P   PV                         N P G  +   W  ++ K+ NG  ++ +  D   YT   +++K  Y +G F + MK  P  + G V++F+     S  ++ DEID EFLG  T +   +Q N +T G+G  E   YL FD ++ +H Y   W      ++VD   + T + N  D
Sbjct:   10 LSVLGLISKTMAAPAPAPVPGTAWNGSHDVMDFNYHESNRFEMSNWPNGEMFNCRWTPNNDKFENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMFQVNMK--PIKNPGVVSSFFTYTGPSDGTKWDEIDIEFLGYDTTK---VQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVYTAYDNIPD 203          
The following BLAST results are available for this feature:
BLAST of EY744375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH30_ARATH1.114e-2540.35Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH3.241e-2539.52Probable xyloglucan endotransglucosylase/hydrolase... [more]
GUB_ORPSP9.154e-1228.14Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-H09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744375 ID=EY744375; Name=EY744375; organism=Citrus sinensis; type=EST; length=927bp
GCTTCAAAATATGGACCCTGCTTCTGGGTATTTTGTTTATGGTGTCAGCA
ACAATGGGAGTTCCACCAAGAAAACCTGTGAATGTCCCATTCGGCAGAAA
CTACATGCCCACTTGGGCTTTTGATCACATCAAATACTTCAATGGTGGCT
CTGAGATTCAGCTTCATCTTGACAAATACACGGGCACTGGCTTCCAATCC
AAAGGAAGTTACTTGTTCGGCCATTTCAGTATGCAAATGAAATTGGTTCC
GGGGGATTCGGCTGGATCTGTCACTGCTTTTTATCTGTCTTCTCAAAACT
CAGAGCATGATGAAATCGATTTTGAGTTCTTGGGCAACAGAACAGGACAG
CCTTACATTCTGCAAACAAATGTGTTCACTGGAGGAAAGGGTGACAGAGA
ACAAAGAATCTATCTTTGGTTTGATCCAACCAAAGCTTACCACTTCTACT
CTGTGCTCTGGAATATGTANNACCGNGTATTCTTCGTGGATGAAATACCA
ATTACAGTGTTCAAAAATTGCAAAGATTTGGGGGTTCGTTTTCCATTCAA
CCAACCGATGAAATATACTCCAAGTCCGGTGGAAGGCAGATGACTGGCGA
CACAAAACGGGGGCTTAGAAAAAACAAATCTGCCCCAAGCCCCTTTCTTT
GCTTTCCAACAAAGGCTTCCATTATAGCTAGCCTGGGGCAACCCCCCCGT
TTAGCGCCAATTCACCTGTCTACCCGCGACGACAACGCCCAGCGTCAATC
CAGACAAACTTACTCGAAAACTTATGCGTACTATAATAAAAAAAAATCAC
ACAGGAGCACAACACCTAGACTAATACATCTTCACGAAACCCGCATGCAC
ACGACCACCGAACACAGACAAACGCCACACAACCAACGGAAGAGGAGCAC
ACAAATAAACAGAGACAATATGCTGAC
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