EY744372

Overview
NameEY744372
Unique NameEY744372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+NI  IGHVD GK+T T  +   L    +  ++ +                 +D    ERERGITI+ A  ++ET + +   +D PGH D++KNMITG +Q D A+L+  +T G          QT  H LLA  +GV  ++   NK D
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCD 139          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+N+  +GH+D GK+T T         I K++ +R   E    ++        +DK   ERERGITI  A  ++ET + +   +D PGH D+IKNMITG +Q D A+L++ +  G          QT  H LL+  +GV  ++   NK+D
Sbjct:    8 RTKPHVNVGTVGHIDHGKTTLTA-------AITKQLAKRGRAEFVPFDQ--------IDKAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAADDGPMP-------QTREHILLSRQVGVPYIVVFLNKVD 139          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 3
Query:   87 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVG-NIP 644
            I  ++K H+NI  IGHVD GK+T T  +   L      V + F                 +D    E+ERGITI+ +  +++T   +   +D PGH D++KNM+TG +Q D A+L++ +T G          QT  H LLA  +GV  ++   NK+D    K      +  ++E+ S  +  G NIP
Sbjct:    5 IFRRDKPHLNIGTIGHVDHGKTTLTASITKVLAKKGLAVAKEFSS---------------IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDKEILELVEIEIRELLSKYEYDGENIP 169          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+NI  IGH+D GK+T T  +   L              A    K  F+    +D    E+ RGITI +A  ++ET + +   +D PGH D+IKNMITG +Q D A++++ +T G          QT  H LLA  +GV  ++   NK+D
Sbjct:    8 RSKPHVNIGTIGHIDHGKTTLTAAITKVL--------------AKHNPKNKFRSFDSIDNAPEEKARGITIAVAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVD 140          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_SALRD (Elongation factor Tu OS=Salinibacter ruber (strain DSM 13855) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            +EK H+N+  IGHVD GK+T T         I K + ER    A    +++F+    +D    ERERGITI  +  ++ET   +   +D PGH D++KNM+TG +Q D A+L++ S  G          QT  H LLA  +GV  ++   NK D
Sbjct:    8 REKPHVNVGTIGHVDHGKTTLTA-------AITKVLAERVGGAA----EQTFE---AIDNAPEERERGITIATSHVEYETENRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVGSDDGPMP-------QTREHILLARQVGVPYLVVFMNKTD 140          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_PICGU (Elongation factor Tu, mitochondrial OS=Pichia guilliermondii GN=TUF1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+NI  IGHVD GK+T T  +                K  +E    +F     +D+   ER RGITI  A  +++T + +   +D PGH D+IKNMITG +Q D A++++ +T G          QT  H LLA  +GV+ ++   NK+D
Sbjct:   32 RSKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLSEKGGANFLDYGSIDRAPEERARGITISTAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHLVVFVNKVD 163          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_PHYMT (Elongation factor Tu OS=Phytoplasma mali (strain AT) GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 67/208 (32.21%), Postives = 103/208 (49.52%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPF-WGPPLASRGDTLIERLTRL 716
            ++K H+N+  IGHVD GK+T T  +   L            K  AE   +S+     +DK K E+ERGITI+     +ET + +   +D PGH D++KNMITG +Q D  +L++ +  G          QT  H LLA  +G+ ++I   NK D    +      +  V+E+ +  K  G+   K PF  G  L +   T +E + +L
Sbjct:    8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCDLVKEEEWIHLVEMEVRELLNEYKFDGD---KTPFVRGSALKALEGTDVEGINKL 190          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_PELUB (Elongation factor Tu OS=Pelagibacter ubique GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGN 638
            + K H NI  IGHVD GK+T T  +   L  +       +++               +DK   E+ERGITI  A  ++ET + +   +D PGH D++KNMITG +Q D A+L++++  G          QT  H LL   +G+  ++   NK+D    K      +E ++E+ +  K  G+
Sbjct:    8 RNKPHCNIGTIGHVDHGKTTLTAAITITLAELGGGKAVAYDQ---------------IDKAPEEKERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLGRQVGIPAIVVYLNKVDQVDDKDMIELVEEEIRELLTSYKYPGD 166          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+NI  IGHVD GK+T T         I K + E+    A +  +        +D    E+ERGITI+ +  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ +T G          QT  H LLA  +GV+ ++   NK D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGITATDFAE--------IDNAPEEKERGITINTSHIEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYLVVFLNKTD 139          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EFTU_LACF3 (Elongation factor Tu OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=tuf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMD 557
            + K H+NI  IGHVD GK+T T  +   L        E +                 +D    E+ERGITI+ A  ++ET + +   IDAPGH D++KNMITG +Q D A+L++ +T G          QT  H LLA  +GV+ ++   NK D
Sbjct:    9 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAAKGLAKAEDYSD---------------IDAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKTD 140          
The following BLAST results are available for this feature:
BLAST of EY744372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_SYNS98.683e-1835.06Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SYNFM8.683e-1835.06Elongation factor Tu OS=Syntrophobacter fumaroxida... [more]
EFTU_SULMW8.683e-1832.09Elongation factor Tu OS=Sulcia muelleri (strain GW... [more]
EFTU_SOLUE8.683e-1835.06Elongation factor Tu OS=Solibacter usitatus (strai... [more]
EFTU_SALRD8.683e-1837.01Elongation factor Tu OS=Salinibacter ruber (strain... [more]
EFTU_PICGU8.683e-1835.06Elongation factor Tu, mitochondrial OS=Pichia guil... [more]
EFTU_PHYMT8.683e-1832.21Elongation factor Tu OS=Phytoplasma mali (strain A... [more]
EFTU_PELUB8.683e-1830.94Elongation factor Tu OS=Pelagibacter ubique GN=tuf... [more]
EFTU_LEUCK8.683e-1837.01Elongation factor Tu OS=Leuconostoc citreum (strai... [more]
EFTU_LACF38.683e-1836.36Elongation factor Tu OS=Lactobacillus fermentum (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-H05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744372 ID=EY744372; Name=EY744372; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGGCTCTCAGCTTCTGCAAGTCGGCGAGAGAGAAACCTTTT
AGCAAATTTCATATCAAGGTTTTATACTAGATTTGCATAATGGGTAAGGA
GAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGT
CGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGT
GTGATCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATT
CAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTA
TTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAGGTACTACTGC
ACCGTCATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTAC
CGGTACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCACCG
GTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACNCCCGGNCATGCT
TTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAA
GATGGACGCCACCACCCCTAAGTACTCAAAGGCTAAGTACGATGAAATTG
TGAAGGAAGTCTCTTCCTAACTGAAAAAGGTTGGAAACATCCCCGGAAAA
GCCCCTTTTTGGGGCCCTCCTCTGGCTTCAAGGGGTGACACCTTGATTGA
AAGGCTTACCCGCCTTAACTGGGACAAGGGGTCCAACCCTGCGTGGAAGG
TCCTGGCACAAATCAATGAAGCCGAAAAAGGCCTCCAAACAACCCCCTTT
TAGTTGGCCAACTCTCGAAAGTCTACAAAAAAATCGGAGGATATAGAAAC
ATCTCTAAGAGGGATCCCCGTCGCATAACAGGGCGGGAGCCTACAAGCTA
GAACACGGGAGGCCAAAACTGATACTCCCCAATCAG
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