EY744372

Overview
NameEY744372
Unique NameEY744372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.078e-76
Identity = 149/218 (68.35%), Postives = 169/218 (77.52%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLN----WDKG 731
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGI+KR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQT  HALLA+TLGVKQMI  CNKMD     +S+ +Y+E+ KE+   LKKVG  P K P   P     G+ L ER  + +    W KG
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIEKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETEKYSFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSQDRYEEVSKEMDLYLKKVGYNPAKVP-KVPTSGWTGENLFERTDKTHALGKWYKG 217          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.936e-74
Identity = 146/214 (68.22%), Postives = 168/214 (78.50%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            MGKEKTHIN+VVIGHVDSGKSTTTGHLIYKLGGIDKR IE+FEKE++EM K SFKYAWVLDKLKAERERGITIDIALW+FET +Y+ TVIDAPGHRDFIKNMITGTSQAD A+L++ +    FE   SK+GQT  HALLAFTLGV+QMI   NKMD  T +Y ++++DEI  EV   LKKVG    K PF        GD ++ER  ++ W KG
Sbjct:    1 MGKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRTIEKFEKESSEMGKGSFKYAWVLDKLKAERERGITIDIALWQFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLVVPADR--FEGAFSKEGQTREHALLAFTLGVRQMIVGINKMD--TCEYKQSRFDEIFNEVDGYLKKVGYNTEKIPFVAIS-GFVGDNMVERSDKMPWYKG 209          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.835e-74
Identity = 144/215 (66.98%), Postives = 165/215 (76.74%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKGS 734
            M KEK H+N+VVIGHVDSGKST+TGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALW FET +   T+IDAPGHRDFIKNMITGTSQAD A+LII S  G FEAGISK+GQT  HALLAFT+GVKQMI   NKMD  +  + + ++ EI KE+S  LKK+   P + PF  P     GD ++E+   + W  GS
Sbjct:    1 MPKEKNHLNLVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWNFETAKSVFTIIDAPGHRDFIKNMITGTSQADAAILIIASGQGEFEAGISKEGQTREHALLAFTMGVKQMIVAVNKMDDKSVNWDQGRFIEIKKELSDYLKKIWLQPRQDPFI-PISGWHGDNMLEKSPNMPWFTGS 214          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 5.537e-73
Identity = 133/218 (61.01%), Postives = 165/218 (75.69%), Query Frame = 3
Query:   99 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKGSNPAWKV 752
            +KTH+NIV+IGHVDSGKSTTTGHLIYK GG D R +E+ E  AA++ K SFK+AW+LDKLKAERERGITIDI+LWKF+T R+  T+IDAPGHRDFIKNMITGTSQAD A+L++ + TG FEAG+S++GQT  HALLA+T+GVKQ+I C NKMD T P YS  ++DE+V+ V   LKK+G  P   PF  P     G+ +     ++ W KG    WKV
Sbjct:    7 QKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKSSFKFAWILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDPPYSHKRFDEVVRNVMVYLKKIGYNPATIPF-VPVSGWTGENISSPSQKMGWFKG----WKV 219          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.996e-72
Identity = 141/216 (65.28%), Postives = 162/216 (75.00%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVG--NIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            MGKEK HIN+VVIGHV +GKSTTTGHLIY  GGIDKR IERFE+    + K SFKYAWVL K+KAERERGITIDI+LWKFET + + T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAG SK+GQT  HALLA TLGVKQMI CCNKMD  +  YS+A+Y EI  E++S L KVG   +  + PF  P     GD +IE    + W KG
Sbjct:    1 MGKEKPHINLVVIGHVVAGKSTTTGHLIYACGGIDKRTIERFEEGGQRIGKGSFKYAWVLAKMKAERERGITIDISLWKFETRKDFFTIIDAPGHRDFIKNMITGTSQADVAILVIASGAGEFEAGYSKNGQTREHALLANTLGVKQMIVCCNKMDDKSVNYSEARYKEIKNEMTSFLTKVGYAKVEERIPFI-PISGFNGDNMIEHSANMPWYKG 215          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.615e-64
Identity = 126/186 (67.74%), Postives = 146/186 (78.49%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPK----YSKAKYDEIVKEVSS*LKKVG 635
            MGKEKTHIN+VVIGHVD+GKSTTTGHLIYKLGGID R I +FE +A EM K SFKYAWVLDKLKAERERGITIDIALWKF T ++  TVIDAPGHRDFIKNMITGTSQAD A+L+ID     FEAGI++ G T  HALLA+TLGVKQ+    NKMD    K    +++ +Y+E+V  +   L K+G
Sbjct:    1 MGKEKTHINLVVIGHVDAGKSTTTGHLIYKLGGIDARTIAKFEADAKEMGKSSFKYAWVLDKLKAERERGITIDIALWKFSTAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDG--NNFEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIG 184          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.511e-62
Identity = 116/214 (54.21%), Postives = 153/214 (71.50%), Query Frame = 3
Query:   90 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            M ++K HIN+VVIGHVD GKST  GHL+Y+LG +D++ I+  E+EA +  K SFKYAW+LD+LK ERERG+TID+   KFET +YY T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQT  H +LA T+G+ Q+I   NKMDAT P YSK +Y++IV  +   +K +G    + PF  P  A  G+ LIER   + W  G
Sbjct:    1 MSQQKPHINLVVIGHVDHGKSTLVGHLLYRLGFVDEKTIKMLEEEAKKKGKESFKYAWLLDRLKEERERGVTIDLTFVKFETKKYYFTIIDAPGHRDFVKNMITGASQADAAILVVSARRGEFEAGMSAEGQTREHLILAKTMGIDQLIVAVNKMDATEPPYSKQRYEQIVAFLKKFMKSLGYKVDQIPFI-PVSAWTGENLIERSPNMPWYNG 213          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.501e-62
Identity = 115/212 (54.25%), Postives = 153/212 (72.17%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            KEK H+N++VIGHVD GKST  GHL+Y+LG +D++ ++  E+EA +  K SFKYAW+LDKLK ERERG+TID+   KFET +YY T+IDAPGHRDFIKNMITG SQAD A+L++ +  G FEAG+S +GQT  H LLA T+G+ Q+I   NKMDAT P +S+ +Y +IV+ +   +K +G    + PF  P  A  GD +I+R   + W KG
Sbjct:    4 KEKPHMNLIVIGHVDHGKSTLVGHLLYELGFVDEKTLKMLEEEAKKRGKESFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPF-VPVSAWTGDNIIKRSENMPWYKG 214          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.294e-61
Identity = 111/211 (52.61%), Postives = 153/211 (72.51%), Query Frame = 3
Query:   99 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            +K H+NIV+IGHVD GKST TGH++Y+LG  D++ ++  E+E+ +M K SFK+AW+LD++K ERERG+TI ++  KFET +Y+ T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQT  HA+LA T+G+ Q+I   NKMDAT P YS+ +Y+EI + +   LK +G    K PF  P  A  G+ LIER   + W  G
Sbjct:    5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSAEGQTREHAILARTMGINQLIVAINKMDATEPPYSEKRYNEIKEILGKFLKGLGYDVSKIPFI-PISAWTGENLIERSPNMPWYNG 214          
BLAST of EY744372 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.083e-60
Identity = 123/212 (58.02%), Postives = 154/212 (72.64%), Query Frame = 3
Query:   96 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTPGHALLAFTLGVKQMICCCNKMDATTPKYSKAKYDEIVKEVSS*LKKVGNIPGKAPFWGPPLASRGDTLIERLTRLNWDKG 731
            KEK H+N+VVIGHVDSGKSTTTGHLIYKLGGID+R + + E++A E+NK SFKYA+VLD LKAE+ERGITI+ AL +F+T     T+IDAPGH+DFIKNMITGTSQAD AVLII +  G FE G S++G T  HALLA+T+G+KQ I   NKMD  T  Y + +++EIV+ VS  L K+G       +  P     GD ++E+   L W KG
Sbjct:    4 KEKDHLNLVVIGHVDSGKSTTTGHLIYKLGGIDERTLAKLEEKALELNKASFKYAFVLDNLKAEQERGITINCALRQFDTPSRSYTIIDAPGHKDFIKNMITGTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD--TIDYDEERFNEIVENVSDHLGKIGYKKENVKYI-PISGFDGDNMLEQSENLPWYKG 212          
The following BLAST results are available for this feature:
BLAST of EY744372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PORYE1.078e-7668.35Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_CRYPV2.936e-7468.22Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_STYLE3.835e-7466.98Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A1_XENLA5.537e-7361.01Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_BLAHO7.996e-7265.28Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1AS_PORPU1.615e-6467.74Elongation factor 1-alpha S OS=Porphyra purpurea G... [more]
EF1A_HYPBU1.511e-6254.21Elongation factor 1-alpha OS=Hyperthermus butylicu... [more]
EF1A_IGNH47.501e-6254.25Elongation factor 1-alpha OS=Ignicoccus hospitalis... [more]
EF1A_DESMO8.294e-6152.61Elongation factor 1-alpha OS=Desulfurococcus mobil... [more]
EF1A2_EUPCR1.083e-6058.02Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-H05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744372 ID=EY744372; Name=EY744372; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGGCTCTCAGCTTCTGCAAGTCGGCGAGAGAGAAACCTTTT
AGCAAATTTCATATCAAGGTTTTATACTAGATTTGCATAATGGGTAAGGA
GAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGT
CGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGT
GTGATCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATT
CAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTA
TTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAGGTACTACTGC
ACCGTCATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTAC
CGGTACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCACCG
GTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACNCCCGGNCATGCT
TTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAA
GATGGACGCCACCACCCCTAAGTACTCAAAGGCTAAGTACGATGAAATTG
TGAAGGAAGTCTCTTCCTAACTGAAAAAGGTTGGAAACATCCCCGGAAAA
GCCCCTTTTTGGGGCCCTCCTCTGGCTTCAAGGGGTGACACCTTGATTGA
AAGGCTTACCCGCCTTAACTGGGACAAGGGGTCCAACCCTGCGTGGAAGG
TCCTGGCACAAATCAATGAAGCCGAAAAAGGCCTCCAAACAACCCCCTTT
TAGTTGGCCAACTCTCGAAAGTCTACAAAAAAATCGGAGGATATAGAAAC
ATCTCTAAGAGGGATCCCCGTCGCATAACAGGGCGGGAGCCTACAAGCTA
GAACACGGGAGGCCAAAACTGATACTCCCCAATCAG
back to top