EY706982

Overview
NameEY706982
Unique NameEY706982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY706982 vs. ExPASy Swiss-Prot
Match: CBR1_HUMAN (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 5.283e-13
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 2
Query:  431 VALTARDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRNVNA 814
            V LTARD  RG AAV++L+  G  +  FH LD+ D  S+ +L  F+  ++G LD+LVNNAGI                      +K+   T  +  AE  ++TN++G + +C  L+PL++      NV++
Sbjct:   33 VVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA---------------------FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 140          

HSP 2 Score: 29.6462 bits (65), Expect = 5.283e-13
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  360 AVVTGANKGIGFEIVRQLASMES 428
            A+VTG NKGIG  IVR L  + S
Sbjct:    8 ALVTGGNKGIGLAIVRDLCRLFS 30          
BLAST of EY706982 vs. ExPASy Swiss-Prot
Match: CBR1_RABIT (Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 1.952e-12
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  431 VALTARDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRNVNA 814
            V LTA+DE +G AAV++L+  G  +  FH LD+TD  S+ +L  F+   +G L++LVNNA I  F ME                    T  +  AE  ++TN+ G + +C  L+PL++      NV++
Sbjct:   33 VLLTAQDEAQGQAAVQQLQAEGL-SPRFHQLDITDLQSIRALRDFLRRAYGGLNVLVNNAVI-AFKMED------------------TTPFHIQAEVTMKTNFDGTRDVCTELLPLMRPGGRVVNVSS 140          

HSP 2 Score: 31.9574 bits (71), Expect = 1.952e-12
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  354 RHAVVTGANKGIGFEIVRQLASMES 428
            R A+VTGANKG+GF I R L  + S
Sbjct:    6 RVALVTGANKGVGFAITRALCRLFS 30          
The following BLAST results are available for this feature:
BLAST of EY706982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CBR1_HUMAN5.283e-1333.85Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]
CBR1_RABIT1.952e-1234.38Carbonyl reductase [NADPH] 1 OS=Oryctolagus cunicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-063-E09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY706982 ID=EY706982; Name=EY706982; organism=Citrus sinensis; type=EST; length=880bp
CTTCCTTCTTTCCCATTATTTTTAAACAAAGGTGTAATTAATTGTCTTCG
AAGAAAACGAAAGCAACATAATTATTCATGATCTCACCACGTGAAACGAT
GTGAACAAAAATATCAGAATAATATTATTTTACTTTCCTGGAGATCCATG
ATGGAGATTGCGCAATACATATACATCTGAAGGGAGTATTCTTCTAGCCA
TGAAAAGGAGCAACCAAGTACATTATTCGATGGGAGAAGCAACAACCAAG
TACATTATTCCCCCTTCCTCTTCTTCTTTCATTTTTTGTTTTTACTTCCT
TTCGGACTCTCTCTCTGTTTTTTTTTTTTTTTTTCAATATGAAATTTCTC
AGCAGGCATGCAGTTGTTACAGGAGCAAACAAGGGAATTGGGTTTGAAAT
TGTGAGGCAATTAGCTTCCATGGAGTCACTGTGGCCTTAACTGCTAGAGA
TGAGAAGAGGGGTCTTGCAGCTGTTGAAAAACTCAAAAACTCTGGCTGTG
ACAATGTGATCTTTCATCTGCTTGATGTGACAGACCCCGCTAGCGTTGAC
TCTCTAGTTCATTTCGTCAGTAGTCAGTTTGGGAAGCTTGATATTCTGGT
AAACAATGCAGGGATTGGTGGATTCAACATGGAAGGTGATAATTTTGTAG
GAATTGTTGAGGGTGGTTTGCCGGACAACTGGTATAAAATGTTAACTCAA
ACTTATGAGTTAGCTGAAAAGTGCATTCAAACAAACTACTATGGTAACAA
AAGAATGTGTGAAGCACTTATTCCCCTCCTCCAGTTATCAGATTCACCCA
GAAATGTTAATGCTCCTCTTCCATGGGGAAAGTAAAGATATAACAAATGA
TGGGGCAAAGGAGTGTTGAGTGATTGGATG
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