EY706975

Overview
NameEY706975
Unique NameEY706975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.703e-34
Identity = 73/150 (48.67%), Postives = 94/150 (62.67%), Query Frame = 3
Query:  246 GFALTTSALVDTGASAEGVPERLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFA-FKPGKYQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQNW 692
            G A   +AL    A   G    LT+DEIQ  TY++VKG+G AN CP ++ G  +    K G Y+ + FC+EPTSFTVK +S  K    +F  TKLMTRLTYTLD ++G F+V   G+    E DGIDY+A T QLPGG+ V FLF I+ +
Sbjct:   32 GQAAAAAALAT--AMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQF 179          

HSP 2 Score: 28.1054 bits (61), Expect = 1.703e-34
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  754 SLFVPKGKGGSTGFENLFA 810
            S   PKG+GGSTG++N  A
Sbjct:  201 SFLDPKGRGGSTGYDNAVA 219          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 2.770e-31
Identity = 68/143 (47.55%), Postives = 88/143 (61.54%), Query Frame = 3
Query:  264 SALVDTGASAEGVPERLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDS-FAFKPGKYQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQN 689
            +AL+    +       LTYDE+QS +Y+EVK +G A  CP +  GV S  + K GKY+   +CLEP+SF VK     K    +F+ TKLMTRLTYTLD I+    V   G+    EKDG+DY+A T QL GG+ VPFLF I+N
Sbjct:   80 AALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKN 222          

HSP 2 Score: 22.7126 bits (47), Expect = 2.770e-31
Identity = 7/15 (46.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  766 PKGKGGSTGFENLFA 810
            PKG+GG++G++   A
Sbjct:  249 PKGRGGASGYDTAVA 263          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.346e-22
Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 3
Query:  339 TYMEVKGTGTANQCP----TIDGGVDSFAFKPGKYQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQN 689
            TY +++GTG AN+CP    T  G +   + K   Y  K+ CLEPT+F VK +  NK    +F   KL+TR T T+D+++G  + +   ++ F EKDG+D+ A+T QLPGG+ VPFLF I+N
Sbjct:   34 TYEQIRGTGLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKN 152          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.314e-21
Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = 3
Query:  330 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQN 689
            Q+ TY ++ GTG AN+CPT+D     ++     + Y+  + CL+PT+F VK +  NK    +F  TKL+TR T +LD+I G  +V+  G++ F E+DGID+  VT Q+ GG+ +P LF ++N
Sbjct:   29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKN 150          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.314e-21
Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = 3
Query:  330 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQN 689
            Q+ TY ++ GTG AN+CPT+D     ++     + Y+  + CL+PT+F VK +  NK    +F  TKL+TR T +LD+I G  +V+  G++ F E+DGID+  VT Q+ GG+ +P LF ++N
Sbjct:   29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKN 150          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 4.582e-20
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  330 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQN 689
            Q  TY E+  TG AN+CP I      S   +PG+ Y     CLEP  + VK + VNK    ++   KL+TR T +L++I+G   V   G + F E+ GID+  VT QLPGG+ VPF F I+N
Sbjct:   32 QDLTYDEILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKN 153          

HSP 2 Score: 22.7126 bits (47), Expect = 4.582e-20
Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  766 PKGKGGSTGFENLFA 810
            PKG+G +TG++N  A
Sbjct:  188 PKGRGLATGYDNAVA 202          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  339 TYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQNW 692
            TY ++  TG AN CP I      +   +P  KY    FC+EP  + VK + VNK    ++   K++TR T +L++I G   V   GT+ F EKDGID+  +T  LPGG+ VPF F ++N+
Sbjct:   35 TYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNF 154          
BLAST of EY706975 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  315 TYDEIQSKTYMEVKGTGTANQCPTI-DGGVDSFAFKPGK-YQPKKFCLEPTSFTVKADSVNKNAPPDFQNTKLMTRLTYTLDEIAGPFEVSPHGTINFAEKDGIDYSAVTFQLPGGDLVPFLFPIQ 686
            T  ++ + TY ++K TG AN+C ++ +    +   + GK Y     CLEP  F VK +  NK    +F   K++TR T +LD++ G   +   GT++F EK GID+ A+T  LPGG+ VPFLF ++
Sbjct:   26 TAADLGTLTYDQIKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVK 151          
The following BLAST results are available for this feature:
BLAST of EY706975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PSBO_CHLRE1.703e-3448.67Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR2.770e-3147.55Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_ANASP1.346e-2243.80Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_THEEB3.314e-2140.98Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNEN3.314e-2140.98Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_CYAA54.582e-2042.62Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNY36.911e-1940.00Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNE74.479e-1838.10Photosystem II manganese-stabilizing polypeptide O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-063-D12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY706975 ID=EY706975; Name=EY706975; organism=Citrus sinensis; type=EST; length=861bp
TACTATTTTGCCAACCACTAGTGGTAAGGAGCAAGATGGCAGCCTCTTTA
CAAGCCGCAGCTATTCTGCTGCAACCCACCAAGGTGGGTGTGGTACCCGC
TCTCAACAGCAGCCTGCAGCTGAGGTCTTCACATAGCGTTTCGAAGGCTT
TTGGTGTCCACTCAGCTGGTGCTAGGATCTCTTGCACTTTGAATAATGAC
TTGAAGGATTTGGCTCAGAAATGTGTTGATGCTACCAAGATCACTGGCTT
TGCCCTCACCACTTCTGCTCTCGTCGATACGGGAGCAAGTGCTGAAGGTG
TTCCAGAGAGGCTAACCTATGATGAAATCCAGAGCAAGACATACATGGAA
GTAAAGGGAACCGGAACTGCTAACCAGTGCCCAACCATTGATGGCGGAGT
TGACTCTTTTGCCTTCAAACCTGGCAAATACCAGCCTAAGAAGTTCTGCC
TAGAACCAACTTCCTTCACTGTCAAGGCTGACAGTGTCAACAAGAATGCC
CCACCAGATTTCCAGAACACCAAGCTTATGACCCGCCTTACCTACACCCT
TGACGAGATTGCAGGACCTTTTGAAGTGTCCCCCCATGGCACCATTAATT
TTGCGGAGAAGGATGGAATTGACTATTCTGCTGTGACCTTTCAGCTGCCT
GGAGGCGACCTTGTGCCCTTCCTTTTCCCCATACAAAATTGGTATCATTA
GGCAACCCTGAAAATTTCTGAAGAGAGGTACTTGGAACATCTTACCGTGT
ATTTCCCTTTTTGTACCAAAGGGAAAGGGTGGCTCAACTGGGTTTGAAAA
TTTATTTGCTTTCCTCCTGGCGGAACAAGGGATTAGGAAAATCTCCCCAG
GGACAAATCTT
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