EY706974

Overview
NameEY706974
Unique NameEY706974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY706974 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.559e-34
Identity = 93/284 (32.75%), Postives = 147/284 (51.76%), Query Frame = 3 
Query:   15 RTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAID---ALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIMMITEWPLKSTLDPEIYGPPESAITTELIEKKIGGMISVEEAIKQKKLFILDYHEIFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTMRPIAIELTRPSMNAKA--QWKQVVFTSWHSTECWLW-S*QSSCHAHDAGYHQL 848
            RTGR +   +  SE R    Y+PRDEAF  VK   F    + S    +VP L +  V   L  P F+  +   +L++ G+ LP         + +P   +     G+  L F  P+ +  D   W  DEEF+R+ +AG+NP+ I  +  +P+KS LD ++YG   S IT E +E  +GG ++VE AI+  +LF  D+H+   PY+ K+    +T  Y +RT+ FL   GT++P+AIEL+ P  +  +     +V   +    E  +W   ++    +D+ YHQL
Sbjct:  245 RTGRKKTVKEPQSESRSDTVYLPRDEAFGHVKSSDFLVYILKSASQNIVPQLRSV-VTLQLNNPEFNTFEDVRSLYDGGIKLPTDVLSKI--SPIPLFSELFRSDGEAALKFPPPKVIQVDHSAWMTDEEFAREMIAGVNPHIIKEVLSFPIKSKLDSQLYGDNTSKITKEHLEPNLGG-VTVEGAIQTNRLFTPDHHDALFPYLRKI-NATATKAYATRTVLFLQDNGTLKPLAIELSTPHPDGDSFGPVSKVYLPASEGVEASIWLLAKAFVVVNDSCYHQL 523
The following BLAST results are available for this feature:
BLAST of EY706974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_LENCU1.559e-3432.75Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-063-D11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY706974 ID=EY706974; Name=EY706974; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGTGCAGAACTGGACGCCCACGGTGTGACACAGATCAATTT
TCGGAGAAAAGAGAGGGAAACTTTTATGTTCCAAGGGATGAAGCATTCTC
GGAGGTAAAGCAGCTAACATTTTCAGCAAAGACGGTGTACTCAGTGTTGC
ATGCGTTGGTACCATCCTTAGAAACCGCCTTTGTCGATCCTGATCTGGGG
TTTCCATACTTCTCTGCTATTGACGCACTCTTCAATGAAGGAGTCAACTT
GCCTCCACTCAAACAGGAAGGTTTTTGGAACACACTGCTTCCCAGATTGG
TTAAGGCAATTGAGGATACAGGAGATAATATTTTGCTGTTTGAGACGCCA
GAAACAATGGACAGAGACAAATTCTTTTGGTTTAGGGATGAGGAATTTTC
TAGGCAAACTCTCGCTGGTCTCAACCCGTATAGCATAATGATGATCACGG
AATGGCCGTTGAAAAGCACACTCGATCCTGAAATTTACGGACCACCAGAA
TCAGCAATTACCACAGAATTGATTGAAAAAAAAATTGGAGGAATGATTTC
TGTTGAAGAGGCTATAAAACAAAAGAAGTTGTTCATCTTAGATTACCATG
AAATATTTTTACCATATGTGGAAAAAGTGAGACAACTCAAAAGCACAACG
TTGTATGGATCTCGCACTATTTTCTTCCTAACACCAGCCGGCACAATGAG
ACCAATAGCTATTGAGCTCACTCGGCCCTCCATGAATGCCAAAGCACAAT
GGAAACAAGTGGTTTTTACTTCTTGGCACTCTACTGAGTGCTGGCTTTGG
AGCTAGCAAAGCTCATGTCATGCTCATGATGCTGGCTATCACCAGCTGTC
AGCATTGGTAAGAACCATT
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