EY662828

Overview
NameEY662828
Unique NameEY662828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.255e-28
Identity = 74/212 (34.91%), Postives = 101/212 (47.64%), Query Frame = 1
Query:  106 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            FF E  L  G  M +          TFL R   K+ PFSS  + EI+  F     S  A I+ + + ECE P   GE K C  S E MIDF+TS LG+ V   +TE   G+K +       G+      ++V CH+  YPY ++YCH+    R Y   L      +      A+CH DTSAW+P H AF  L        +CH++ E+ + W
Sbjct:  409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.579e-27
Identity = 84/227 (37.00%), Postives = 122/227 (53.74%), Query Frame = 1
Query:  103 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGS-VEAEIMQNTIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKGTKM--QTYTIAAGVKQMAADK--SVVCHKQNYPYAVFYCHATQTTRAYMVPLEG-ADGT--------KAKAAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVWGP 735
            L FLE  L PG  +  + T  +  A FL R  A S P S+    +I   FS  P S V A+ +Q+ +  CE    IKGE++ CATS+ES+++F+ S LG + ++A S +V     M    Y + A V+ +A  +  +V CH   +P+AVFYCHA   TR Y V LE   DG+        K +A AVCH DTS ++P+   F    ++     +CHF+  D ++W P
Sbjct:  111 LHFLEDALKPGSIITPYITGIATRAPFLRRDIADSIPVSTKNFADILAMFS--PISLVMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRDLRAFSPDVPPEGIMPGNMYKVVA-VRTVAGLRGDTVTCHTMRFPFAVFYCHAINPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDTSRFDPKTPLFVEHNLRPGDASVCHFVSRDSVIWAP 334          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.579e-27
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 1
Query:   37 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE----QKYCATSLESMIDFSTSKLG-KSVQAISTEV---KKGTKMQTYTIAAGVKQMA--ADKSVVCHKQNYPYAVFYCHATQTTRAYMVP 573
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   + GE    + YCATSLESM++F  S LG + V A+STEV      T  Q Y + A V+ +A      V CH   Y YAVF  H  +      VP
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEA-VRPVAVPGGDMVACHGMPYAYAVFGLHGLKGAGGGRVP 229          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.280e-26
Identity = 69/187 (36.90%), Postives = 93/187 (49.73%), Query Frame = 1
Query:  178 TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            +FL R      PFS+ KL EI   F     S    I+ + + ECE P   GE K C  S E MIDF+TS LG+SV   +TE   G+K +       G+      K+V CH+  YPY ++YCH+    R Y   L   +  K      A+CH DTS+W P H AF  L  K     +CH++ E+ + W
Sbjct:  436 SFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNW 622          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.888e-26
Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  178 TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            +FL R      PFS+ K+ EI   F     S    I+ + ++ECE P    E K C  S E MIDF+TS LG+SV   +TE   G+K +       G+      KSV CH+  YPY ++YCH+    R Y   L     +KAK     A+CH DTSAW   H AF +L  +     +CH++ E+ + W
Sbjct:  432 SFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPK-SKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNW 618          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.633e-26
Identity = 72/235 (30.64%), Postives = 110/235 (46.81%), Query Frame = 1
Query:   52 YVYAANENQLHDDPNTA-LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVK-KGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA---KAAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVWGP 735
            Y+++     +H       L+F E +L PG  +          + FL R  +K  PFS   + +I   FS    ++ A+ +  T++ CE  G + GE+  CATS+ES++D   S LG K V+A++     +G     Y +A+      +   + CH   YPY VF+CH  + TR Y V L   +  +       AVCH +TS W+  H  F  + VK      CHF     I+W P
Sbjct:  273 YIHSHGHGHVHFPEGAKDLYFFEDNLAPGSVLITRILSARQSSIFLHRNNSKHIPFSMKNITDILTMFSPVSATM-ADGIAATLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKLVRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCHTPKQTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDWDTGHPFFHFMDVKPGETTACHFFGRGSIIWVP 506          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.930e-25
Identity = 73/213 (34.27%), Postives = 104/213 (48.83%), Query Frame = 1
Query:  106 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S  A+++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE   G+K         G+      KSV CH+  YP  ++YCH+    R Y   +   + +KAK     A+CH DTS+W P+H AF  L        +CH++ E+ + W
Sbjct:  417 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPN-SKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTW 628          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.520e-25
Identity = 73/213 (34.27%), Postives = 104/213 (48.83%), Query Frame = 1
Query:  106 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S  A+++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE   G+K         G+      KSV CH+  YP  ++YCH+    R Y   +   + +KAK     A+CH DTS+W P+H AF  L        +CH++ E+ + W
Sbjct:  414 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPN-SKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTW 625          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 72/213 (33.80%), Postives = 102/213 (47.89%), Query Frame = 1
Query:  106 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S   +++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE  KG+          G+      KSV CH+  YPY ++YCH+    R Y   +   + +K K     A+CH DTS+W P H AF  L        +CH++ E+ + W
Sbjct:  415 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPN-SKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHWIFENDMTW 626          
BLAST of EY662828 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25
Identity = 71/227 (31.28%), Postives = 102/227 (44.93%), Query Frame = 1
Query:   61 AANENQLHDDPNTALFFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQ-TYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTSAWNPQHLAFQVLQVKARTGPICHFLPEDHIVW 729
            ++    L   P    FF E +L  G  M +           FL R  AK  PF  + + E+F    V   +   + + +T+ ECE    +GE K CATS E ++DF+   LG  +   ST    G+  Q       GV      +SV CH+  +PY V+YCH+    R Y   +  AD  +      A+CH DTS W+P H AF  L  K     +CH++ E  + W
Sbjct:  400 SSGHQHLKWSPEPGKFFRETELVSGNTMPMPDIKDKMPPRAFLPRDIAKKIPFKPNAVSEVFG---VPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTW 623          
The following BLAST results are available for this feature:
BLAST of EY662828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
Y639_ARATH9.255e-2834.91Probable polygalacturonase non-catalytic subunit A... [more]
BURPA_ORYSJ1.579e-2737.00BURP domain-containing protein 10 OS=Oryza sativa ... [more]
BURP1_ORYSJ1.579e-2742.33BURP domain-containing protein 1 OS=Oryza sativa s... [more]
JP650_ARATH2.280e-2636.90Probable polygalacturonase non-catalytic subunit J... [more]
JP630_ARATH3.888e-2636.70Probable polygalacturonase non-catalytic subunit J... [more]
BURP9_ORYSJ6.633e-2630.64BURP domain-containing protein 9 OS=Oryza sativa s... [more]
GP3_SOLLC1.930e-2534.27Polygalacturonase non-catalytic subunit AroGP3 OS=... [more]
GP2_SOLLC2.520e-2534.27Polygalacturonase non-catalytic subunit AroGP2 OS=... [more]
GP1_SOLLC3.292e-2533.80Polygalacturonase-1 non-catalytic subunit beta OS=... [more]
BURPC_ORYSJ7.333e-2531.28BURP domain-containing protein 12 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-048-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662828 ID=EY662828; Name=EY662828; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCAAGGGAAAGCTAGCCTATGTTGGAGTAAGCCCATTCAA
CTATGTATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAG
CTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCATGAAGATGAACTTG
CACTTCACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGC
CAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCAGT
TTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGCAGAACACAATC
AAAGAGTGTGAAGACCCTGGCATTAAAGGAGAGCAGAAATATTGTGCAAC
TTCACTGGAGTCAATGATTGACTTCAGCACTTCTAAGCTTGGAAAGAGTG
TTCAGGCAATTTCTACGGAGGTAAAAAAAGGAACCAAGATGCAGACATAT
ACAATCGCAGCTGGAGTGAAGCAGATGGCAGCTGACAAATCAGTAGTGTG
CCATAAGCAGAACTATCCATATGCTGTATTCTACTGCCATGCAACACAAA
CCACAAGGGCTTACATGGTTCCCTTGGAAGGTGCTGATGGGACAAAAGCC
AAAGCAGCAGCAGTCTGCCACACAGATACATCAGCATGGAACCCCCAGCA
TTTAGCTTTTCAAGTGCTNCAAGTTAAAGCCAGAACTGGTCCTATATGTC
ACTTCCTTCCTGAGGATCACATTGTCTGGGGTCCCAATAAGAAGACTGGA
GAATAGAAATTGATCCTCCTATCCCATCTACTTAATCAGCAGAGTTTGAA
ATCAGTCAGTCAAGCAGGTATCCATTTANGTTGACAATATTTACTTTGAA
TACCAAGGTCATTTTGTATGCATACATTAGCCTGCCTGAACTCAAAACTG
GGGGGCCTAGGATTATCTTATCTACCTATGGACC
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