EY662745

Overview
NameEY662745
Unique NameEY662745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  189 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 246
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.435e-18
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            RKWF +NVSA+V+A+ RI YGGS   ANC+ELAA+PD+DGFLVGGASLKPEFI I+ +
Sbjct:  188 RKWFTENVSADVSAAIRIQYGGSVTAANCRELAAKPDIDGFLVGGASLKPEFIQIVNA 245
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.874e-18
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R+W + NVS +VA S RIIYGGS  G  CKEL AQPD+DGFLVGGASLKPEFIDII +
Sbjct:  189 REWLKTNVSEDVAKSVRIIYGGSVTGGTCKELGAQPDIDGFLVGGASLKPEFIDIINA 246
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.874e-18
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NV+  VA STRIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 2.448e-18
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 1 
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W + NVS  VA S RIIYGGS  GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  190 RGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
The following BLAST results are available for this feature:
BLAST of EY662745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
TPIS_RABIT6.441e-1975.86Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB6.441e-1975.86Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR6.441e-1975.86Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN6.441e-1975.86Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_GORGO6.441e-1975.86Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPIS_CANFA6.441e-1975.86Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_CULTA1.435e-1870.69Triosephosphate isomerase OS=Culex tarsalis GN=Tpi... [more]
TPIS_XENTR1.874e-1872.41Triosephosphate isomerase OS=Xenopus tropicalis GN... [more]
TPIS_MOUSE1.874e-1874.14Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]
TPIS_BOVIN2.448e-1874.14Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662745 ID=EY662745; Name=EY662745; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAAATGGTTTCAAGACAATGTCAGTGCTGAAGTTGC
AGCATCAACTAGAATCATCTACGGAGGTTCTGCAAATGGAGCAAATTGCA
AAGAATTGGCAGCACAACCTGATGTAGATGGATTTTTGGTTGGTGGAGCT
TCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAGTGAAGAA
GAATTGAAGTTAAGACCAAGCTACTCGGCTTGCTGATGCCTGCAGTTTTC
TCTGTTATGCTTTCTGGAAACTAGCGTTGTAATTTTTGTGGTCTGTTAAG
TGTTACCAACGCCTTTCGAGTATAATAAGTTAAATTTTCAGAATTGTTAA
GAATCTCTTTCCTATTTCAGTGGGGATTTGAAACTTATCATTGTGGATTT
AATAAATGTTTGCTTTTCCCTTCTAAAAAAAAAAAAAAA
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