EY662745

Overview
NameEY662745
Unique NameEY662745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4)

HSP 1 Score: 74.7146 bits (182), Expect = 1.815e-13
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDII 180
            RKW  + + A VA   R+IYGGS NG NCKE     D+DGFLVGGASLKPEF +I+
Sbjct:  189 RKWATNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGASLKPEFHNIV 244          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.815e-13
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R+    ++ A+ A  TRI+YGGS NG N  E   + DVDGFLVGGASLKPEF+DIIKS
Sbjct:  189 REHLSKSIGADAAEKTRILYGGSVNGKNAPEFKDKADVDGFLVGGASLKPEFVDIIKS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSATVKK 201
            RKW  + VS +VA  T I+YGGS N  NC  L+ Q D+DGFLVGGASL   +FI IIKSA  KK
Sbjct:  193 RKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQSDIDGFLVGGASLVASDFIAIIKSAVPKK 256          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R W   NVS  V+ + RI YGGS   AN KELA+  D+DGFLVGGASLKPEF++I+ +
Sbjct:  189 RNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVNA 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSATVK 198
            RKW  +N+S EVA +TRI YGGS N ANC ELA + D+DGFLVGGASL   +F  II S + K
Sbjct:  198 RKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIINSVSEK 260          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1
Query:   31 NVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            ++ AE A  TRI+YGGS NG N K+   + +VDGFLVGGASLKPEF+DIIKS
Sbjct:  195 SIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFLVGGASLKPEFVDIIKS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R++  + +S +VA S RI+YGGSANG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 REFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R +  + +  + A  TRI+YGGSANGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 RSYLAEKLGKDTAEKTRILYGGSANGANAGTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R++    +  + A  TRI+YGGSANG N      +PDVDGFLVGGASLKPEF+DII S
Sbjct:  189 REFLAKKLGEKTAQETRILYGGSANGKNAVTFKDKPDVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.537e-12
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R +  +  S +VA + RI++GGSANGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 RDFLAERTSRDVADAVRILFGGSANGANAASFRDKADVDGFLVGGASLKPEFVDIINS 246          
The following BLAST results are available for this feature:
BLAST of EY662745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
TPIS_SCHPO1.815e-1360.71Triosephosphate isomerase OS=Schizosaccharomyces p... [more]
TPIS_DEBHA1.815e-1360.34Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_DICDI2.371e-1359.38Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_BOMMO2.371e-1358.62Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE... [more]
TPIS_ENTHI3.096e-1360.32Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPIS_CANAL5.281e-1365.38Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_KLULA6.898e-1360.34Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_CANGA9.009e-1358.62Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPIS_ZYGBA1.177e-1258.62Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_ASHGO1.537e-1258.62Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662745 ID=EY662745; Name=EY662745; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAAATGGTTTCAAGACAATGTCAGTGCTGAAGTTGC
AGCATCAACTAGAATCATCTACGGAGGTTCTGCAAATGGAGCAAATTGCA
AAGAATTGGCAGCACAACCTGATGTAGATGGATTTTTGGTTGGTGGAGCT
TCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAGTGAAGAA
GAATTGAAGTTAAGACCAAGCTACTCGGCTTGCTGATGCCTGCAGTTTTC
TCTGTTATGCTTTCTGGAAACTAGCGTTGTAATTTTTGTGGTCTGTTAAG
TGTTACCAACGCCTTTCGAGTATAATAAGTTAAATTTTCAGAATTGTTAA
GAATCTCTTTCCTATTTCAGTGGGGATTTGAAACTTATCATTGTGGATTT
AATAAATGTTTGCTTTTCCCTTCTAAAAAAAAAAAAAAA
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