EY662745

Overview
NameEY662745
Unique NameEY662745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4072 contig Csv1_Contig4072:656..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_CAEEL (Triosephosphate isomerase OS=Caenorhabditis elegans GN=tpi-1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.423e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R + ++ VS  VA +TRIIYGGS    N  EL  +PD+DGFLVGGASLKP+F+ II +
Sbjct:  188 RAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINA 245          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.839e-12
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            RK+    +  + A+  RI+YGGSANG+N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 RKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R++    +S + A   RI+YGGSANG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 REFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R + +D + A+ A   RIIYGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  189 RAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLKPEFVDIINS 245          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_TRYCR (Triosephosphate isomerase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 186
            R+W +  +  ++AA  RI+YGGS    N + L    D++GFLVGGASLKPEF++II++
Sbjct:  192 RRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFVEIIEA 249          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 189
            RK  +D    + A   RI+YGGS N  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:  189 RKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
BLAST of EY662745 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1
Query:   13 RKWFQDNVSAEVAASTRIIYGGSANGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 189
            RK  +D    + A   RI+YGGS N  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:  189 RKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
The following BLAST results are available for this feature:
BLAST of EY662745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
TPIS_CAEEL3.423e-1256.90Triosephosphate isomerase OS=Caenorhabditis elegan... [more]
TPIS_YEAST5.839e-1256.90Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_KLUMA1.301e-1156.90Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_YARLI3.785e-1158.62Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_TRYCR3.785e-1148.28Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_PLAFA3.785e-1155.93Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF73.785e-1155.93Triosephosphate isomerase OS=Plasmodium falciparum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662745 ID=EY662745; Name=EY662745; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAAATGGTTTCAAGACAATGTCAGTGCTGAAGTTGC
AGCATCAACTAGAATCATCTACGGAGGTTCTGCAAATGGAGCAAATTGCA
AAGAATTGGCAGCACAACCTGATGTAGATGGATTTTTGGTTGGTGGAGCT
TCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAGTGAAGAA
GAATTGAAGTTAAGACCAAGCTACTCGGCTTGCTGATGCCTGCAGTTTTC
TCTGTTATGCTTTCTGGAAACTAGCGTTGTAATTTTTGTGGTCTGTTAAG
TGTTACCAACGCCTTTCGAGTATAATAAGTTAAATTTTCAGAATTGTTAA
GAATCTCTTTCCTATTTCAGTGGGGATTTGAAACTTATCATTGTGGATTT
AATAAATGTTTGCTTTTCCCTTCTAAAAAAAAAAAAAAA
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