EY662743

Overview
NameEY662743
Unique NameEY662743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7372 contig Csv1_Contig7372:17..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_CHICK (Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.565e-42
Identity = 93/194 (47.94%), Postives = 115/194 (59.28%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYV--------SSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL     +P  PVP +I +P Y         S  +L   S + +I   E I  MR VC LA  VLD A  +V+  VTT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+N+D+TVY NGYHGD ++TF +  V +G KRLV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPL-----TPTRPVPSYIQRPDYADHPLGMSESEQALKGTS-QIKILSPEDIEGMRVVCRLAREVLDVAAMMVKAGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITVYRNGYHGDLNETFYVGEVDEGAKRLVQTTYECLMQAIDAVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_BOVIN (Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.565e-42
Identity = 93/193 (48.19%), Postives = 115/193 (59.59%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  MR VC LA  VLD A  L++P VTT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF + +V +G ++LV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPLM-----PTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDIAAGLIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGDVDEGARKLVQTTYECLMQAIDAVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_XENTR (Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 91/194 (46.91%), Postives = 116/194 (59.79%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYV--------SSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL     +P  PVP +I +P Y         S  +L   S + +I  +E I  MR VC LA  VL  A  +V+  +TT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQDGDI+N+D+TVY +GYHGD ++TF + +V +G KRLV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPL-----TPMRPVPSYIQRPDYADHPLGMSESEQALKGTS-QIKILSTEDIEGMRVVCRLAREVLGVAAMMVKSGITTEEIDHAVHLACISRNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQDGDIVNVDITVYRDGYHGDLNETFYVGDVDEGAKRLVETTYECLMQAIDEVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_XENLA (Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 92/193 (47.67%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL     +P  PVP +I +P Y       S S   L    QI     E I  MR VC LA  VL  A  +V+  +TT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQDGDI+N+D+TVY +GYHGD ++TF + +V +G KRLV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPL-----TPMRPVPSYIQRPDYADHPLGMSESEQTLKGTSQIKTLSPEDIEGMRVVCRLAREVLGVAAMMVKSGITTEEIDHAVHLACISRNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQDGDIVNVDITVYRDGYHGDLNETFYVGDVDEGAKRLVETTYECLMQAIDEVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_MOUSE (Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 91/193 (47.15%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  MR VC LA  VLD A  +++  VTT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF + +V +G ++LV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPLM-----PTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDIAAGMIKAGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGDVDEGARKLVQTTYECLMQAIDAVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_DANRE (Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 91/193 (47.15%), Postives = 115/193 (59.59%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-------STSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL     +P   VP +I +P Y         S      + + +I ++E I  MR VC+LA  VLD A  +V+P VTT EID AVH        YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+NID+TVY NGYHGD ++TF +  V +G KRLV+ T ECL + I   K G  +++
Sbjct:   83 TGKLRPYYPL-----TPMRLVPSNIQRPDYADHPLGMSESEQTMKGTSQIKILNAEEIEGMRVVCKLAREVLDIAAMMVKPGVTTEEIDHAVHLACTARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRHLQEGDILNIDITVYHNGYHGDLNETFFVGEVDEGAKRLVQTTYECLMQAIDSVKPGIRYRE 270          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM_MYCTU (Methionine aminopeptidase OS=Mycobacterium tuberculosis GN=map PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.050e-38
Identity = 83/175 (47.43%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  278 RPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDG 802
            R  L  G +SP  PVP+ I +P YV   +  + S  + +   E I KMR    +AA  L  AGK V P VTT+E+D+  H+ +++ GAYPS LGY GFPKS CTS+NE +CHGIPDS  + DGDI+NIDVT Y+ G HGDT+ TF   +V+D  + LV  T E   + I   K G
Sbjct:    4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPW-VQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPG 177          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM_MYCBO (Methionine aminopeptidase OS=Mycobacterium bovis GN=map PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.050e-38
Identity = 83/175 (47.43%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  278 RPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDG 802
            R  L  G +SP  PVP+ I +P YV   +  + S  + +   E I KMR    +AA  L  AGK V P VTT+E+D+  H+ +++ GAYPS LGY GFPKS CTS+NE +CHGIPDS  + DGDI+NIDVT Y+ G HGDT+ TF   +V+D  + LV  T E   + I   K G
Sbjct:    4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPW-VQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPG 177          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_DICDI (Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 79/184 (42.93%), Postives = 114/184 (61.96%), Query Frame = 2
Query:  284 PLRRGRVSPRLPVPDHIPKPPY-VSSTSLPDLSPEYQ-----IHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            PLR   ++P    P+ I  P Y + S  + +   + +     IH  E I  MR + +++  VLD AG   +  +TT E+D  VH  +IE GAYPSPL Y  FPKS CTS+NE +CHGIPD R L+DGDI+N+DVT+Y  G+H D ++T+L+ NV +  K LVK   +CL+  +A+CK G  +++
Sbjct:   70 PLRPTNITPMRKAPEGIELPDYAIGSIPISERVADRKNMANIIHTPEEIEIMRQLGKMSREVLDIAGNAAKVGMTTEELDIIVHNAVIERGAYPSPLNYYKFPKSCCTSLNEVICHGIPDERPLRDGDILNVDVTLYWKGFHSDLNETYLIGNVDERGKNLVKCAYDCLELAVAMCKPGTLYRE 253          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_YEAST (Methionine aminopeptidase 1 OS=Saccharomyces cerevisiae GN=MAP1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.886e-38
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  302 VSPRLPVPDHIPKPPYVSSTSLP------DLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLL-RNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            ++PR  VP+ IPKP + ++  LP      D      I+  + I K+R  C L   VLD A   VRP +TT+E+D+ VH   I+ GAYPSPL Y  FPKS+CTSVNE +CHG+PD   L++GDI+N+DV++Y  GYH D ++T+ +  N+S       + + ECLK  I +CK G  F++
Sbjct:   94 LTPRRYVPEDIPKPDWAAN-GLPVSEQRNDRLNNIPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVGENISKEALNTTETSRECLKLAIKMCKPGTTFQE 271          
The following BLAST results are available for this feature:
BLAST of EY662743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
AMPM1_CHICK1.565e-4247.94Methionine aminopeptidase 1 OS=Gallus gallus GN=ME... [more]
AMPM1_BOVIN1.565e-4248.19Methionine aminopeptidase 1 OS=Bos taurus GN=METAP... [more]
AMPM1_XENTR1.014e-4146.91Methionine aminopeptidase 1 OS=Xenopus tropicalis ... [more]
AMPM1_XENLA2.260e-4147.67Methionine aminopeptidase 1 OS=Xenopus laevis GN=m... [more]
AMPM1_MOUSE2.260e-4147.15Methionine aminopeptidase 1 OS=Mus musculus GN=Met... [more]
AMPM1_DANRE2.260e-4147.15Methionine aminopeptidase 1 OS=Danio rerio GN=meta... [more]
AMPM_MYCTU1.050e-3847.43Methionine aminopeptidase OS=Mycobacterium tubercu... [more]
AMPM_MYCBO1.050e-3847.43Methionine aminopeptidase OS=Mycobacterium bovis G... [more]
AMPM1_DICDI3.054e-3842.93Methionine aminopeptidase 1 OS=Dictyostelium disco... [more]
AMPM1_YEAST8.886e-3843.58Methionine aminopeptidase 1 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662743 ID=EY662743; Name=EY662743; organism=Citrus sinensis; type=EST; length=873bp
TTCGTCGACCCACGCGTCCGGAAGAATGGTATCGGCGGCTTCAGTGTCGC
ATGGCCACGGGTCATCTTCCTTCTTACATGGATCTTCAAAACCAAAGTTA
AACTCTGCTTCAGCTCTTTTCACGGGGGCCCCACTGTCGCTCTCTCCATC
CTCCACCGGAAGACAAGCACGTTGTCCGAAGAAACTCGTCGTTCATGCAA
AGAGAATTTCTGGGTTAGAGGAGGCCATGAGAATTAGGAGAGAACGTGAG
CTTCAAACTACAACTAAATTTAGAAAAAGACCACCTTTGAGGCGTGGAAG
GGTATCTCCGCGACTTCCCGTGCCTGATCACATACCCAAGCCTCCTTATG
TAAGTTCAACTTCGCTTCCAGACCTTTCACCTGAGTACCAAATTCACGAT
TCTGAGAGCATTGCTAAAATGAGGGCTGTGTGTGAACTAGCTGCGCGAGT
CCTGGATGCTGCTGGAAAATTGGTCAGGCCATCGGTGACAACCAATGAAA
TTGACAAAGCAGTGCACCAAATGATAATAGAGGCTGGAGCTTATCCTTCA
CCTCTTGGCTATGGAGGATTTCCTAAGAGTGTGTGTACATCAGTTAATGA
ATGCATGTGTCATGGAATACCTGATTCTCGCCAGTTACAGGATGGTGACA
TAATAAACATTGATGTGACAGTTTATTTAAATGGTTACCATGGCGATACA
TCAAAGACATTTCTTTTGCGGAATGTTAGTGATGGGCTTAAACGCCTTGT
GAAAGTTACTGAAGAATGCTTGAAGAAGGGTATAGCAGTTTGTAAAGATG
GTGCTAATTTCAAGAAATCGGAAAGAGATCAGTGAACACCCTGAAAATAT
GGGTTCGGTGGAGGGGAACGTTT
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