EY662737 | Citrus Genome Database

Overview


Name	EY662737
Unique Name	EY662737
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	944

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.222e-89
Identity = 148/176 (84.09%), Postives = 156/176 (88.64%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQ 634
            MRE ISIHIGQAG+QVGNACWELYCLEHGIQPDG MPSDKT+G  DDAFNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL F +V             E +SVDYGKKSKLGFTVYPSPQ
Sbjct:    1 MREVISIHIGQAGVQVGNACWELYCLEHGIQPDGLMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQ 176

HSP 2 Score: 41.5874 bits (96), Expect = 2.222e-89
Identity = 33/85 (38.82%), Postives = 43/85 (50.59%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPK 902
            V EPYN  LSTH+L+  +    V+ D E +Y I R    I + TYTNL  L +  I S  A     G  +V+ T     LVP P+
Sbjct:  181 VVEPYNSVLSTHALL-EHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 2.222e-89
Identity = 147/180 (81.67%), Postives = 157/180 (87.22%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQMPS+KT+GGGDDAFNTFFSETG GKHVPR VF+DL PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD IRKLAD CTGLQGFL F++V             E +SVDYGKKSKLGFT+YPSPQ S +
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSNKTIGGGDDAFNTFFSETGTGKHVPRCVFLDLGPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDGIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

HSP 2 Score: 42.743 bits (99), Expect = 2.222e-89
Identity = 36/91 (39.56%), Postives = 45/91 (49.45%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPKRPLMRS 920
            V EPYN  LSTHSL+  +    V+ D E +Y I R    I + TYTNL  L +  I S  A     G  +V+ T     LVP P+   M S
Sbjct:  181 VVEPYNSVLSTHSLL-EHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLS 270

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.781e-89
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD +VG   DAFNTFFSETG+GKHVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFL F+AV             E +SVDYGKKSKLGFT+YPSPQ S +
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

HSP 2 Score: 44.2838 bits (103), Expect = 3.781e-89
Identity = 38/95 (40.00%), Postives = 45/95 (47.37%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPKRPLMRSP*CP 932
            V EPYN  LSTHSL+  +    VL D E +Y I R    I + TYTNL  L S  I S        G  +V+ T     LVP P+   M S   P
Sbjct:  181 VVEPYNSVLSTHSLL-EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAP 274

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.781e-89
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD +VG   DAFNTFFSETG+GKHVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFL F+AV             E +SVDYGKKSKLGFT+YPSPQ S +
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

HSP 2 Score: 44.2838 bits (103), Expect = 3.781e-89
Identity = 38/95 (40.00%), Postives = 45/95 (47.37%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPKRPLMRSP*CP 932
            V EPYN  LSTHSL+  +    VL D E +Y I R    I + TYTNL  L S  I S        G  +V+ T     LVP P+   M S   P
Sbjct:  181 VVEPYNSVLSTHSLL-EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAP 274

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 6.434e-89
Identity = 146/180 (81.11%), Postives = 156/180 (86.67%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPR VF+DLEPTV+DEVRTGTYR LFHPEQLISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFL F+AV             E +SVDYGKKSKL F  +PSPQ S +
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTA 180

HSP 2 Score: 43.8986 bits (102), Expect = 6.434e-89
Identity = 37/95 (38.95%), Postives = 46/95 (48.42%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPKRPLMRSP*CP 932
            V EPYN  LSTHSL+  +    V+ D E +Y I R    I + TYTNL  L +  I S  A     G  +V+ T     LVP P+   M S   P
Sbjct:  181 VVEPYNSVLSTHSLL-EHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 274

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA_NEOCA (Tubulin alpha chain OS=Neospora caninum GN=TUBA PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 6.434e-89
Identity = 146/180 (81.11%), Postives = 156/180 (86.67%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPR VF+DLEPTV+DEVRTGTYR LFHPEQLISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFL F+AV             E +SVDYGKKSKL F  +PSPQ S +
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTA 180

HSP 2 Score: 43.8986 bits (102), Expect = 6.434e-89
Identity = 37/95 (38.95%), Postives = 46/95 (48.42%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPKRPLMRSP*CP 932
            V EPYN  LSTHSL+  +    V+ D E +Y I R    I + TYTNL  L +  I S  A     G  +V+ T     LVP P+   M S   P
Sbjct:  181 VVEPYNSVLSTHSLL-EHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 274

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 6.434e-89
Identity = 148/180 (82.22%), Postives = 157/180 (87.22%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG MPSDKT+G  DDAFNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL +HAV             E +SVDYGKKSKLG+TVYPSPQ S +
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTA 180

HSP 2 Score: 40.0466 bits (92), Expect = 6.434e-89
Identity = 32/85 (37.65%), Postives = 41/85 (48.24%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPK 902
            V EPYN  LSTHSL+       +L D E +Y + R    I + TYTNL  L    + S  A     G  +V+ T     LVP P+
Sbjct:  181 VVEPYNSVLSTHSLLEHTDVAAML-DNEAIYDLTRRNLDIERPTYTNLNRLIGQVVSSLTASLRFDGALNVDLTEFQTNLVPYPR 264

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 8.393e-89
Identity = 145/180 (80.56%), Postives = 159/180 (88.33%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANN+ARGHYTIGKEI+DL LDR+RKLAD CTGLQGFL FH+              E +SVDYGKKSKL F++YP+PQ S +
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

HSP 2 Score: 36.5798 bits (83), Expect = 8.393e-89
Identity = 30/85 (35.29%), Postives = 41/85 (48.24%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPK 902
            V EPYN  L+TH+ +  +     + D E +Y I R    I + TYTNL  L S  + S  A     G  +V+ T     LVP P+
Sbjct:  181 VVEPYNSILTTHTTL-EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 264

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.095e-88
Identity = 147/176 (83.52%), Postives = 155/176 (88.07%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQ 634
            MRE ISIHIGQAG+QVGNACWELYCLEHGIQPDG MPS KT+G  DDAFNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL F +V             E +SVDYGKKSKLGFTVYPSPQ
Sbjct:    1 MREVISIHIGQAGVQVGNACWELYCLEHGIQPDGLMPSSKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQ 176

HSP 2 Score: 41.5874 bits (96), Expect = 1.095e-88
Identity = 33/85 (38.82%), Postives = 43/85 (50.59%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPK 902
            V EPYN  LSTH+L+  +    V+ D E +Y I R    I + TYTNL  L +  I S  A     G  +V+ T     LVP P+
Sbjct:  181 VVEPYNSVLSTHALL-EHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264

[Close]

BLAST of EY662737 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.095e-88
Identity = 149/180 (82.78%), Postives = 157/180 (87.22%), Query Frame = 2

Query:  107 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLGFHAVXXXXXXXXXXXXXEEVSVDYGKKSKLGFTVYPSPQGSNS 646
            MRE ISIHIGQAG QVGNACWELYCLEHGIQPDGQMPSDK+VG GDDAFNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDLCLDR+RKLAD CTGLQGFL FH+V             E +SVDYGKKSKL F VYPSPQ S +
Sbjct:    1 MREVISIHIGQAGTQVGNACWELYCLEHGIQPDGQMPSDKSVGYGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRVRKLADQCTGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTA 180

HSP 2 Score: 39.2762 bits (90), Expect = 1.095e-88
Identity = 32/85 (37.65%), Postives = 41/85 (48.24%), Query Frame = 3

Query:  648 VGEPYNRGLSTHSLVGTY*RGLVLPDTEGLY*IRRGPP*I*QATYTNLIELGSPGIFSFAAPTEGGGRCDVEGTGI*HKLVPLPK 902
            V EPYN  LSTHSL+       +L D E +Y I +    I + TYTNL  L +  I S        G  +V+ T     LVP P+
Sbjct:  181 VVEPYNSVLSTHSLLEHTDVAFML-DNEAIYDICKRALDIDRPTYTNLNRLVAQVISSLTTSLRFDGALNVDITEFQTNLVPYPR 264

The following BLAST results are available for this feature:

BLAST of EY662737 vs. ExPASy Swiss-Prot

BLAST of EY662737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 411


Match Name	E-value	Identity	Description
TBA1_NAEGR	2.222e-89	84.09	Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=...	[more]
TBA2_STYLE	2.222e-89	81.67	Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 S...	[more]
TBA6_MAIZE	3.781e-89	81.11	Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV...	[more]
TBA3_ELEIN	3.781e-89	81.11	Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 ...	[more]
TBA_TOXGO	6.434e-89	81.11	Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1	[more]
TBA_NEOCA	6.434e-89	81.11	Tubulin alpha chain OS=Neospora caninum GN=TUBA PE...	[more]
TBA_TRYBR	6.434e-89	82.22	Tubulin alpha chain OS=Trypanosoma brucei rhodesie...	[more]
TBA1C_BOVIN	8.393e-89	80.56	Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=...	[more]
TBA13_NAEGR	1.095e-88	83.52	Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUB...	[more]
TBAD_PHYPO	1.095e-88	82.78	Tubulin alpha-1A chain OS=Physarum polycephalum GN...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-047-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY662737 ID=EY662737; Name=EY662737; organism=Citrus sinensis; type=EST; length=944bp
TTCCCGACCCACGCGTCCGAATTTCACAAGATGGCGTCTTAATAAACGCC
TTCGTTTAGATTCAATTACTTTACGTCGTCGTTTTTTCTTCTCTTAATCT
GCGAAAATGAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCA
GGTCGGAAATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGC
CTGATGGCCAAATGCCAAGTGATAAGACAGTCGGAGGTGGCGACGATGCT
TTCAACACCTTTTTCAGTGAAACTGGTGCAGGGAAGCACGTGCCTCGTGC
TGTCTTTGTTGATCTTGAGCCCACTGTCATTGATGAAGTGAGGACCGGAA
CTTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAAGAC
GCTGCCAACAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGT
TGATCTCTGCCTTGACCGCATCAGGAAGCTGGCTGATAACTGCACTGGTC
TCCAGGGATTCCTTGGGTTTCATGCTGTTGGTGGAGGAACTGGCTCTGGC
CTTGGGTCTCCTCTTCTGGAGGAGGTGTCTGTTGACTATGGAAAGAAATC
AAAGTTGGGCTTCACTGTCTACCCTTCTCCTCAGGGCTCCAATTCCTGTT
GGTGAGCCTTACAACAGGGGCCTCTCAACCCACTCCCTGGTTGGAACATA
CTGAAGGGGGCTGGTCCTTCCCGACACAGAAGGCCTTTATTGAATTCGGC
GGGGGCCCCCTTGAATTTGACAGGCTACCTATACTAACCTAATTGAACTT
GGTTCCCCGGGCATTTTCTCATTTGCCGCGCCCACGGAGGGTGGGGGGCG
TTGTGATGTGGAGGGGACTGGAATTTAACACAAGCTGGTGCCCCTACCCA
AAAGACCCCTAATGCGTTCCCCCTAGTGCCCCGGCTTTCTGCCT