EY662709

Overview
NameEY662709
Unique NameEY662709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7776 contig Csv1_Contig7776:1..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.858e-19
Identity = 56/187 (29.95%), Postives = 92/187 (49.20%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGM-AVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTXIRTVGHADKR 838
            W LAK  V + D   HQ ++H LR+H V E + IA  RQL  +HP+++LL  H+R+T+ +N   R+ LI   G+ +  N    G +   +   + D    +     P+ +  RGM + ED          +  Y +  DGL +W  ++ +  + V+ YY +  +VE D ELQ +   +   G   K+
Sbjct:  348 WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQD--LTYSSLCFPEAIKARGMDSTED----------MPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKK 522          

HSP 2 Score: 29.261 bits (64), Expect = 2.858e-19
Identity = 15/67 (22.39%), Postives = 32/67 (47.76%), Query Frame = 1
Query:   37 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLW 237
            +E+ +++  +F++DY  L      K     H  L     + +    N + P+AI+L + P +  P++
Sbjct:  273 LEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNPIF 339          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 2.859e-19
Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGM-AVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQ 793
            W LAK  V + D   HQ ++H LR+H V E + IA  RQL  +HP+++LL  H+R+T+ +N   R+ L    G+ +  N    G +   +   + D    +     P+ +  RGM   ED          I  Y +  DGL +W  ++ + T+ V+ YY D  +VE D ELQ
Sbjct:  347 WLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATGGGGHVQMVQRAVQD--LTYSSLCFPEAIKARGMDNTED----------IPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQ 506          

HSP 2 Score: 28.8758 bits (63), Expect = 2.859e-19
Identity = 15/67 (22.39%), Postives = 32/67 (47.76%), Query Frame = 1
Query:   37 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLW 237
            +E+ +++  +F++DY  L      K     H  L     + +    N + P+AI+L + P +  P++
Sbjct:  272 LEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGEKNPIF 338          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX15_PONAB (Arachidonate 15-lipoxygenase OS=Pongo abelii GN=ALOX15 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.339e-19
Identity = 61/179 (34.08%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTXIRTVG 823
            W LAK  V + D   H+L SH LR H + E  ++AT R L  +HPI++L+ PHLRYTLE+N   R  L+S  G+ +   S G                +     P DL  RG+         G+K +     +A+D L LW I+ ++V   V+ +Y     V+ D ELQ W   I  +G
Sbjct:  340 WLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGLL--------GVKSSF----YAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIG 506          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.339e-19
Identity = 61/179 (34.08%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTXIRTVG 823
            W LAK  V + D   H+L SH LR H + E  ++AT R L  +HPI++L+ PHLRYTLE+N   R  L+S  G+ +   S G                +     P DL  RG+         G+K +     +A+D L LW I+ ++V   V+ +Y     V+ D ELQ W   I  +G
Sbjct:  340 WLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGLL--------GVKSSF----YAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIG 506          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX12_PIG (Arachidonate 12-lipoxygenase, 12S-type OS=Sus scrofa GN=ALOX12 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.339e-19
Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = 2
Query:  284 LWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAW---WTXIRTVGHADK 835
            +W LAK  V + D   H+L SH LR H + E   +AT R L  +HPI++LL PH RYT+E+N   R+ L+S  G+ +   S G     E     ++++      +     P DL  RG+            L ++   +A+D L LW ++ ++V   V+ +Y     V+ D ELQAW   +T I  +G  D+
Sbjct:  340 VWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALL-----TYSSFCPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR 514          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.797e-18
Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGM-AVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQ 793
            W LAK  V + D   HQ ++H L +H V E + IA  RQL  +HPI++LL  H+R+T+ +N   R+ LI   G+ +  N    G +   +   + D    +     P+ +  RGM + ED          I  Y +  DGL +W  ++ + ++ V+ YY D  +V  D ELQ
Sbjct:  347 WLLAKIWVRSSDFHVHQTITHLLCTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQD--LTYSSLCFPEAIKARGMDSTED----------IPYYFYRDDGLLVWEAIQSFTSEVVSIYYEDDQVVMEDQELQ 506          

HSP 2 Score: 28.8758 bits (63), Expect = 1.797e-18
Identity = 15/67 (22.39%), Postives = 32/67 (47.76%), Query Frame = 1
Query:   37 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLW 237
            +E+ +++  +F++DY  L      K     H  L     + +    N + P+AI+L + P +  P++
Sbjct:  272 LEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQAPGEKNPIF 338          
BLAST of EY662709 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 2
Query:  287 WRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTXIRTVG 823
            W LAK  V + D   HQ ++H LR+H V E + IA  RQL  +HPI++LL  H+R+T+ +N   R+ LI   G+ +  N    G +   +   +  K   +     P+ +  RGM  ++          I  Y +  DGL +W  ++ +  + V+ YY    +VE D ELQ +   +   G
Sbjct:  348 WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM--KDLTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYG 517          
The following BLAST results are available for this feature:
BLAST of EY662709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX5_MOUSE2.858e-1929.95Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOX5_RAT2.859e-1932.56Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LOX15_PONAB3.339e-1934.08Arachidonate 15-lipoxygenase OS=Pongo abelii GN=AL... [more]
LOX15_HUMAN3.339e-1934.08Arachidonate 15-lipoxygenase OS=Homo sapiens GN=AL... [more]
LOX12_PIG3.339e-1932.29Arachidonate 12-lipoxygenase, 12S-type OS=Sus scro... [more]
LOX5_MESAU1.797e-1831.98Arachidonate 5-lipoxygenase OS=Mesocricetus auratu... [more]
LOX5_HUMAN2.646e-1630.39Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662709 ID=EY662709; Name=EY662709; organism=Citrus sinensis; type=EST; length=899bp
TTTCGTCGACCCACGCGTCCGGGAGCAATGTCTCCTGTTGAAGAGGCTAT
AGAACAAAAGAAGTTGTTCATGTTAGATTACCATGACCTATTTCTGCCCT
ATGTAGAAAAAGTGAGGAAGCTCGAACACACGACCTTGTATGGGTCCCGC
ACTGTATTCTTCCTAACTCCAGATAACACGTTGAGACCACTAGCCATTGA
GTTAACTCGGCCACCAATGGACGACAAGCCACTTTGGAGAAAAGTGTATA
CACCGGNGTTCTTGGAATTCAACTAAGACCTGGCTTTGGAGGCTAGCCAA
AGCTCATGTTCTTGCTCATGATTCGGGCTATCACCAGCTTGTCAGCCATT
GGTTAAGAAGTCATTGTGTGGTAGAACCTTACATAATTGCTACCAATCGA
CAACTCAGTGTGATGCATCCAATCTATAGATTGTTGCATCCTCATCTTCG
ATACACATTGGAGCTCAATGCTATAGGTCGGGATATACTTATTAGTGCTG
GTGGAGTCATTGAAAACACATTCTCACCTGGAGAATATTGTATGGAGATG
AGTTCTGTTATCTATGATAAGCAATGGCGATTTGACGAACAAGCACTCCC
CAAAGACCTTATGAAGAGGGGAATGGCCGTTGAAGATCCAAATGCTCGAC
ACGGCTTAAAGCTAACAATTGACGACTATCCTTTTGCCAAGGACGGTCTC
GATCTATGGGGTATCTTAAAACAATGGGTTACCGATTATGTGAATCACTA
CTATCCTGATCAAAGTCTTGTCGAGTCTGATGATGAACTCCAAGCTTGGT
GGACTNGAATTCGAACTGTCGGACACGCTGACAAAAGGATGAACCTTGGT
GGCCCTGTCTGAAACCCCTCAAAANTTGATTGAATCTTAACACTATCAT
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