EY662708 | Citrus Genome Database

Overview


Name	EY662708
Unique Name	EY662708
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	878

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
EY662708_ssr347	microsatellite	EY662708_ssr347:347..364.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4843	contig	Csv1_Contig4843:8..888.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.126e-77
Identity = 92/122 (75.41%), Postives = 112/122 (91.80%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            ++NDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K  N+IKLYVRRVFIM+NCEEL+PEYL F+KG+VDSEDLPLNISRE LQQ +ILKVIRKNLVKKC+EL  E+AE+ +++ KF
Sbjct:  287 LSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCMELIDEVAEDKDNFKKF 408

HSP 2 Score: 111.309 bits (277), Expect = 1.126e-77
Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            VT+ +NDD+ Y WES AGGSF V R  +   + RGTKI +H+KEDQ+++LEER++K+++KKHS+FI YPI L +                                              E   +NK KPIW R P++I+ EEYA FYKS
Sbjct:  138 VTSKNNDDDSYQWESSAGGSFVV-RPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKLVVEKEREKEVEDEEAVEAKDEEKKEGEVENVADDADKKKTKKIKEKYFEDEELNKTKPIWTRNPDDISNEEYAEFYKS 286

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 191.815 bits (486), Expect = 1.915e-77
Identity = 91/124 (73.39%), Postives = 109/124 (87.90%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKFMS 841
            ++NDWE+ L VKHFSVEGQLEF+AILF+PKRAPFDLF+++KK NNIKLYVRRVFI D  E+LIPE+L FVKG+VDSEDLPLN+SRE LQQ +I+KVIRKN+VKK IE F EIAE+ E ++KF S
Sbjct:  292 ISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFDKFYS 415

HSP 2 Score: 119.783 bits (299), Expect = 1.915e-77
Identity = 65/156 (41.67%), Postives = 83/156 (53.21%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS------HEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            V + +N+DEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++IK+HSEF++YPI L +                                                    E   +NK KP+W R P +IT+EEY AFYKS
Sbjct:  136 VISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLLVTKEVEKEVPIPEEEKKDEEKKDEDDKKPKLEEVDEEEEEKKPKTKKVKEEVQELEELNKTKPLWTRNPSDITQEEYNAFYKS 291

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.230e-76
Identity = 93/122 (76.23%), Postives = 112/122 (91.80%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            ++NDWE+HLAVKHFSVEGQLEF+A+LF P+RAPFDLF+ +K  N+IKLYVRRVFIM+NCEEL+PEYL F+KG+VDSEDLPLNISRE LQQ +ILKVIRKNLVKKC+ELF EIAE+ +++ KF
Sbjct:  291 LSNDWEDHLAVKHFSVEGQLEFRALLFAPQRAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCMELFDEIAEDKDNFKKF 412

HSP 2 Score: 106.686 bits (265), Expect = 1.230e-76
Identity = 60/154 (38.96%), Postives = 81/154 (52.60%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSL----VNKQKPIWMRKPEEITKEEYAAFYKS 471
            VT+ +NDD+ Y WES AGGSF V R  +   L RGTKIT+++KEDQ+++LEER++K+++KKHS+FI YPI L +                                              E       +NK KPIW R P++I+ EEYA FYKS
Sbjct:  138 VTSKNNDDDSYQWESSAGGSFVV-RPYNDPELTRGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPIKLVVEKEREKEVEDEEAVESKDEEKKEGDVENVGEDADAEKDKKKTKKIKEKYFEDEELNKTKPIWTRNPDDISNEEYAEFYKS 290

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.343e-75
Identity = 91/124 (73.39%), Postives = 108/124 (87.10%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKFMS 841
            ++NDWE+ L VKHFSVEGQLEF+AILF+PKRAPFDLF+++KK NNIKLYVRRVFI D  E+LIPE+L FVKG+VDSEDLPLN+SRE LQQ +I+KVIRKN+VKK IE F EIAE+ E + KF S
Sbjct:  296 ISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYS 419

HSP 2 Score: 114.005 bits (284), Expect = 1.343e-75
Identity = 64/160 (40.00%), Postives = 82/160 (51.25%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQ----------KPIWMRKPEEITKEEYAAFYKS 471
            V +  NDDEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++IK+HSEF++YPI L +                                              +   V ++          KP+W R P +IT+EEY AFYKS
Sbjct:  136 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKS 295

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.610e-75
Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 2

Query:  473 TNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKFMS 841
            TNDWE+HLAVKHFSVEGQLEF+AILFVPKRAPFDLF+T+K  NNIKLYVRRVFI D+  +LIPE+L F+KG+VDSEDLPL +SRETLQQ +I+KVI KN+VKK +ELF EIAE+ E ++KF S
Sbjct:  290 TNDWEDHLAVKHFSVEGQLEFRAILFVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLSFIKGVVDSEDLPLGLSRETLQQNKIMKVI-KNIVKKTLELFNEIAEDREQFDKFYS 411

HSP 2 Score: 112.849 bits (281), Expect = 6.610e-75
Identity = 61/156 (39.10%), Postives = 82/156 (52.56%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLV-----NKQKPIWMRKPEEITKEEYAAFYKSD 474
            V +  NDDEQYIWES AGG+F VT+D  G  +GRGTK+ LHLK++Q EYL E ++K+++KK SEFI YPI L +                                              + + +     NK KPIW R P +IT+EEYA+FYK++
Sbjct:  136 VISKSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQTEYLNESKIKEVVKKQSEFIFYPIYLHVLKENEKEVPDEDAEEVKDEGDDKAPKVEEVDEDEEDKTKAKKTKKIKENKIEEEELNKTKPIWTRNPADITQEEYASFYKTN 291

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.127e-74
Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPLNISRE LQQ +ILKVIRKNLVKKCIE+F EIAEN EDYNKF
Sbjct:   88 LTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKF 209

HSP 2 Score: 70.8626 bits (172), Expect = 1.127e-74
Identity = 37/87 (42.53%), Postives = 41/87 (47.13%), Query Frame = 1

Query:  211 EFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            EFISYPI LW                                            VSHEW L+NKQKPIW+RKPEEITK+EYA+FYKS
Sbjct:    1 EFISYPIYLWTEKTTEKEISDDEDDEPKKDEEGAVEEVDEDKEKEKGKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKS 87

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.447e-65
Identity = 100/122 (81.97%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEFKA+LFVP+RAPFD+F++RKK NNIKLYVRRVFIMD+CEELIPE+L FVKG+VDSEDLPLNISRETLQQ +ILKVIRKNLVKKC+ELF E+ E  ED+ KF
Sbjct:  311 LTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFESRKKKNNIKLYVRRVFIMDDCEELIPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFNELTEKKEDFKKF 432

HSP 2 Score: 58.151 bits (139), Expect = 1.447e-65
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 1

Query:  373 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            V+ EW ++NKQKPIWMR P E+T EEYAAFYK+
Sbjct:  278 VTREWEMLNKQKPIWMRLPSEVTNEEYAAFYKN 310

HSP 3 Score: 108.227 bits (269), Expect = 6.253e-23
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISL 237
            V + +N D+QY+WES A G FTV +D S EPL RGT++ LHLKEDQ EYLEERRLK+L+KKHSEFIS+PISL
Sbjct:  143 VVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISL 214

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.447e-65
Identity = 100/122 (81.97%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            ++NDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLF+TRKK NNIKLYVRRVFIMD+CE++IPE+L FVKG+VDSEDLPLNISRE+LQQ +ILKVIRKNLVKKC+E+F EI E  E+Y KF
Sbjct:  300 LSNDWEEHLAVKHFSVEGQLEFKALLFVPKRAPFDLFETRKKRNNIKLYVRRVFIMDDCEDIIPEWLNFVKGVVDSEDLPLNISRESLQQNKILKVIRKNLVKKCLEMFAEIEEKKENYAKF 421

HSP 2 Score: 60.8474 bits (146), Expect = 1.447e-65
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 1

Query:  373 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            V+ EW  +NKQKP+WMRKPEE+T+EEYA+FYKS
Sbjct:  267 VTREWEQLNKQKPLWMRKPEEVTEEEYASFYKS 299

HSP 3 Score: 120.168 bits (300), Expect = 1.590e-26
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISL 237
            V + HNDDEQY+WES AGGSFTV +D   EPLGRGT+I LHLKEDQ EYLEERRLKDL+KKHSEFIS+PI L
Sbjct:  137 VVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEFISFPIEL 208

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 1.564e-61
Identity = 101/122 (82.79%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWEEHLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ RKK NNIKLYVRRVFIMDNCEELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKNLVKKC+ELF E+AE+ E+Y KF
Sbjct:  317 LTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKF 438

HSP 2 Score: 43.1282 bits (100), Expect = 1.564e-61
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT EEY  FYKS
Sbjct:  291 LNKTKPIWTRNPDDITNEEYGEFYKS 316

HSP 3 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  150 VITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 215.312 bits (547), Expect = 1.564e-61
Identity = 101/122 (82.79%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWEEHLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ RKK NNIKLYVRRVFIMDNCEELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKNLVKKC+ELF E+AE+ E+Y KF
Sbjct:  317 LTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKF 438

HSP 2 Score: 43.1282 bits (100), Expect = 1.564e-61
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT EEY  FYKS
Sbjct:  291 LNKTKPIWTRNPDDITNEEYGEFYKS 316

HSP 3 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  DT GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  150 VITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222

The following BLAST results are available for this feature:

BLAST of EY662708 vs. ExPASy Swiss-Prot

BLAST of EY662708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383


Match Name	E-value	Identity	Description
HSP90_CAEEL	1.126e-77	75.41	Heat shock protein 90 OS=Caenorhabditis elegans GN...	[more]
HSC82_YEAST	1.915e-77	73.39	ATP-dependent molecular chaperone HSC82 OS=Sacchar...	[more]
HSP90_CAEBR	1.230e-76	76.23	Heat shock protein 90 OS=Caenorhabditis briggsae G...	[more]
HSP82_YEAST	1.343e-75	73.39	ATP-dependent molecular chaperone HSP82 OS=Sacchar...	[more]
HSP82_AJECA	6.610e-75	74.80	Heat shock protein 82 OS=Ajellomyces capsulata GN=...	[more]
HSP82_TOBAC	1.127e-74	91.80	Heat shock protein 82 (Fragment) OS=Nicotiana taba...	[more]
HSP90_THEPA	1.447e-65	81.97	Heat shock protein 90 OS=Theileria parva GN=TP02_0...	[more]
HSP90_EIMTE	1.447e-65	81.97	Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ...	[more]
HS90A_RAT	1.564e-61	82.79	Heat shock protein HSP 90-alpha OS=Rattus norvegic...	[more]
HS90A_MOUSE	1.564e-61	82.79	Heat shock protein HSP 90-alpha OS=Mus musculus GN...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-047-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY662708 ID=EY662708; Name=EY662708; organism=Citrus sinensis; type=EST; length=878bp
TTCCGTCGACCCACGCGTCCGGTTACCGCTACCCACAACGATGATGAGCA
GTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACCAGGGACA
CTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAG
GAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAA
GAAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGA
CCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAATAAAAGAAGGAT
GAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAA
GAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACA
AGCAGAAACCCATTTGGATGAGGAAACCCGAGGAGATTACAAAAGAAGAG
TATGCTGCCTTCTACAAGAGTGACTAATGACTGGGAGGAGCACTTGGCTG
TGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTT
GTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAA
TAACATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAGG
AGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAG
GATCTCCCTCTTAACATCTCAAGAGAAACGCTCCAGCAGAAACAGATCTT
GAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAG
AGATTGCTGAGAACANGGAAGATTACAACAAGTTTATGAGTCATTCTCTA
AGAACCTAAGCTTGGTATCCACGAGGAC