EY662708 | Citrus Genome Database

Overview


Name	EY662708
Unique Name	EY662708
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	878

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 7.429e-60
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  308 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKF 429

HSP 2 Score: 43.5134 bits (101), Expect = 7.429e-60
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  282 LNKTKPIWTRNPDDITQEEYGEFYKS 307

HSP 3 Score: 21.1718 bits (43), Expect = 7.429e-60
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  427 KKFYEAFSKNLKL 439

HSP 4 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 209.149 bits (531), Expect = 7.429e-60
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  308 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKF 429

HSP 2 Score: 43.5134 bits (101), Expect = 7.429e-60
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  282 LNKTKPIWTRNPDDITQEEYGEFYKS 307

HSP 3 Score: 21.1718 bits (43), Expect = 7.429e-60
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  427 KKFYEAFSKNLKL 439

HSP 4 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 7.429e-60
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  308 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKF 429

HSP 2 Score: 43.5134 bits (101), Expect = 7.429e-60
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  282 LNKTKPIWTRNPDDITQEEYGEFYKS 307

HSP 3 Score: 21.1718 bits (43), Expect = 7.429e-60
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  427 KKFYEAFSKNLKL 439

HSP 4 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 7.429e-60
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  308 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKF 429

HSP 2 Score: 43.5134 bits (101), Expect = 7.429e-60
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  282 LNKTKPIWTRNPDDITQEEYGEFYKS 307

HSP 3 Score: 21.1718 bits (43), Expect = 7.429e-60
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  427 KKFYEAFSKNLKL 439

HSP 4 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.398e-60
Identity = 92/122 (75.41%), Postives = 111/122 (90.98%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            ++NDWE+ +A KHFSVEGQLEF++I+FVPKRAPFD+F+  KK NNIKLYVRRVFIMDNCE+L P++LGFVKG+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+E+F E+AEN EDY +F
Sbjct:   40 ISNDWEDPMATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQF 161

HSP 2 Score: 49.2914 bits (116), Expect = 8.398e-60
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 1

Query:  373 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            V+ E+ + NK KP+W R P+++TKEEYAAFYK+
Sbjct:    7 VTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKA 39

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.671e-60
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  309 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFTELAEDKENYKKF 430

HSP 2 Score: 43.5134 bits (101), Expect = 9.671e-60
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  283 LNKTKPIWTRNPDDITQEEYGEFYKS 308

HSP 3 Score: 21.1718 bits (43), Expect = 9.671e-60
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  428 KKFYEAFSKNLKL 440

HSP 4 Score: 112.079 bits (279), Expect = 4.331e-24
Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYV 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.091e-59
Identity = 96/122 (78.69%), Postives = 114/122 (93.44%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A+LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMDNCEELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ ++Y KF
Sbjct:  307 LTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFAELAEDKDNYKKF 428

HSP 2 Score: 41.5874 bits (96), Expect = 1.091e-59
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++I+ EEY  FYKS
Sbjct:  281 LNKTKPIWTRNPDDISNEEYGEFYKS 306

HSP 3 Score: 111.694 bits (278), Expect = 5.656e-24
Identity = 50/74 (67.57%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EY+EE+R+K+++KKHS+FI YPI+L++
Sbjct:  144 VITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTEYIEEKRVKEVVKKHSQFIGYPITLYV 216

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.259e-59
Identity = 95/122 (77.87%), Postives = 113/122 (92.62%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQLEF+A LF+P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++G+VDSEDLPLNISRE LQQ +ILKVIRKN+VKKC+ELF E+AE+ E+Y KF
Sbjct:  308 LTNDWEDHLAVKHFSVEGQLEFRAFLFIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKF 429

HSP 2 Score: 43.5134 bits (101), Expect = 1.259e-59
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R P++IT+EEY  FYKS
Sbjct:  282 LNKTKPIWTRNPDDITQEEYGEFYKS 307

HSP 3 Score: 21.1718 bits (43), Expect = 1.259e-59
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1

Query:  826 QQVYESFSKNLSL 864
            ++ YE+FSKNL L
Sbjct:  427 KKFYEAFSKNLKL 439

HSP 4 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            V   HNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  145 VITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.421e-59
Identity = 64/153 (41.83%), Postives = 85/153 (55.56%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSH---EWSLVNKQKPIWMRKPEEITKEEYAAFYKS 471
            V + HNDD+QY+WES+A GSF ++ DT  EPLGRGT+I LHL+++  EYLEE +LKDL+KK+SEFI++PI LW                                            V     EW L+N  K +W+R P+E+T+EEYA FY S
Sbjct:  212 VVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEEESNEEEESTTETTEEEETEDDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHS 364

HSP 2 Score: 123.635 bits (309), Expect = 1.421e-59
Identity = 58/115 (50.43%), Postives = 85/115 (73.91%), Query Frame = 2

Query:  485 EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXED 823
            ++ ++  HFS EG +EFKA+LFVP +AP DL+++    N  N+KLYVRRVFI D  ++L+P+YL F+ GIVDS+ LPLN+SRE LQQ   LK I+K L++K +++ +++AE   D
Sbjct:  372 DKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLPKYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPD 486

[Close]

BLAST of EY662708 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 9.108e-59
Identity = 97/122 (79.51%), Postives = 113/122 (92.62%), Query Frame = 2

Query:  470 VTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQKQILKVIRKNLVKKCIELFQEIAENXEDYNKF 835
            +TNDWE+HLAVKHFSVEGQL+F+A+LFVP+R PFDLF+ +KK NNIKLYVRRVFIMDNCEELIP+YL F+KG+VDSEDLPLNISRE LQQ +ILKVIRKNLVKKC+ELF+E+AE+ E Y KF
Sbjct:  296 LTNDWEDHLAVKHFSVEGQLDFRALLFVPRRMPFDLFENKKKKNNIKLYVRRVFIMDNCEELIPDYLNFIKGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELAEDKETYKKF 417

HSP 2 Score: 38.891 bits (89), Expect = 9.108e-59
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 1

Query:  394 VNKQKPIWMRKPEEITKEEYAAFYKS 471
            +NK KPIW R  ++I++EEY  FYKS
Sbjct:  270 LNKTKPIWTRNADDISQEEYGEFYKS 295

HSP 3 Score: 112.849 bits (281), Expect = 2.539e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1

Query:   22 VTATHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 243
            VT+ +NDDEQY+WES AGGSFTV  D SGEPLGRGTKI LH+KEDQLEYLEE ++K ++ KHS+FI YPI L +
Sbjct:  140 VTSKNNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHIKEDQLEYLEESKIKQIVNKHSQFIGYPIKLLV 212

The following BLAST results are available for this feature:

BLAST of EY662708 vs. ExPASy Swiss-Prot

BLAST of EY662708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383


Match Name	E-value	Identity	Description
HS90B_MACFA	7.429e-60	77.87	Heat shock protein HSP 90-beta OS=Macaca fascicula...	[more]
HS90B_HUMAN	7.429e-60	77.87	Heat shock protein HSP 90-beta OS=Homo sapiens GN=...	[more]
HS90B_HORSE	7.429e-60	77.87	Heat shock protein HSP 90-beta OS=Equus caballus G...	[more]
HS90B_BOVIN	7.429e-60	77.87	Heat shock protein HSP 90-beta OS=Bos taurus GN=HS...	[more]
HSP83_LEIDO	8.398e-60	75.41	Heat shock protein 83 (Fragment) OS=Leishmania don...	[more]
HS90B_CHICK	9.671e-60	77.87	Heat shock cognate protein HSP 90-beta OS=Gallus g...	[more]
HS90B_DANRE	1.091e-59	78.69	Heat shock protein HSP 90-beta OS=Danio rerio GN=h...	[more]
HS90B_MOUSE	1.259e-59	77.87	Heat shock protein HSP 90-beta OS=Mus musculus GN=...	[more]
ENPL_HORVU	1.421e-59	41.83	Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1	[more]
HSP83_ANOGA	9.108e-59	79.51	Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-047-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY662708 ID=EY662708; Name=EY662708; organism=Citrus sinensis; type=EST; length=878bp
TTCCGTCGACCCACGCGTCCGGTTACCGCTACCCACAACGATGATGAGCA
GTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACCAGGGACA
CTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAG
GAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAA
GAAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGA
CCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAATAAAAGAAGGAT
GAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAA
GAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACA
AGCAGAAACCCATTTGGATGAGGAAACCCGAGGAGATTACAAAAGAAGAG
TATGCTGCCTTCTACAAGAGTGACTAATGACTGGGAGGAGCACTTGGCTG
TGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTT
GTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAA
TAACATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAGG
AGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAG
GATCTCCCTCTTAACATCTCAAGAGAAACGCTCCAGCAGAAACAGATCTT
GAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAG
AGATTGCTGAGAACANGGAAGATTACAACAAGTTTATGAGTCATTCTCTA
AGAACCTAAGCTTGGTATCCACGAGGAC