EY662321

Overview
NameEY662321
Unique NameEY662321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:200..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662321 vs. ExPASy Swiss-Prot
Match: PALY_RHOTO (Phenylalanine ammonia-lyase OS=Rhodosporidium toruloides GN=PAL PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 2
Query:   53 EIASASYCSELQFLANPVTNHVQRAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLK 277
            +IA+A+Y SEL  LANPVT HVQ AE  NQ VNSL LIS+R+T E+ D+L L+ +T L  + QAIDLR +E   K
Sbjct:  471 DIAAAAYTSELGHLANPVTTHVQPAEMANQAVNSLALISARRTTESNDVLSLLLATHLYCVLQAIDLRAIEFEFK 545          
BLAST of EY662321 vs. ExPASy Swiss-Prot
Match: PALY_USTMA (Phenylalanine ammonia-lyase OS=Ustilago maydis GN=PAL1 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 2
Query:   53 EIASASYCSELQFLANPVTNHVQRAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 265
            +IA AS  SEL FL NPV+ HVQ AE  NQ +NSL LIS R+T +A++ L ++ +  L  LCQA+D+R L+
Sbjct:  470 DIALASVTSELMFLGNPVSTHVQSAEMANQAINSLALISGRQTLQAIECLSMIQAWSLYLLCQALDIRALQ 540          
BLAST of EY662321 vs. ExPASy Swiss-Prot
Match: PALY_AMAMU (Phenylalanine ammonia-lyase OS=Amanita muscaria GN=PAL PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 56/217 (25.81%), Postives = 102/217 (47.00%), Query Frame = 2
Query:   53 EIASASYCSELQFLANPVTNHVQRAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEK--DLLKAADREHVFAYID-DPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKT---VLPKEVENARQTVENGSPTIPNRIKECRSYPLYRFVREGLG 685
            +IA+A+Y +E    A P   H+Q AE HNQ VNSL LIS+R T  ++++L  + +++L  LCQA+DLR L+      +   + +  +      + G    S   EK    L +A  +H+      D       +      VL++   ++G +   ++  +   +++F+  + T   VL  ++       + G       I + R  P+Y+F+R  +G
Sbjct:  487 DIATAAYVAE----ATPGPTHIQSAEMHNQAVNSLALISARATITSLEVLTSLIASYLYILCQALDLRALQREFLPGLDIIIREELR-----SSFGSFLSSEQMEKLQQNLTSAFEDHLDKTTTMDNTDRMTTMAATSSSVLLQFFTDSGASVPPSSCDLLSSVSSFQSSVATRSSVLMDDLRKEYIFGDRGPTPASQYIGKTR--PVYQFIRTTIG 692          
The following BLAST results are available for this feature:
BLAST of EY662321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PALY_RHOTO8.605e-1557.33Phenylalanine ammonia-lyase OS=Rhodosporidium toru... [more]
PALY_USTMA6.167e-1352.11Phenylalanine ammonia-lyase OS=Ustilago maydis GN=... [more]
PALY_AMAMU9.845e-1125.81Phenylalanine ammonia-lyase OS=Amanita muscaria GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662321 ID=EY662321; Name=EY662321; organism=Citrus sinensis; type=EST; length=905bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCTTCGAACAACCACGCGTC
CGGAAATTGCTTCCGCTTCCTATTGTTCGGAGCTCCAATTTCTTGCCAAT
CCTGTTACTAACCACGTTCAACGTGCTGAACAGCACAACCAAGATGTAAA
CTCCTTGGGATTGATCTCTTCCAGGAAGACTGCTGAAGCAGTCGACATCC
TGAAGCTCATGTCTTCCACATTCTTGGTAGCGCTTTGCCAGGCTATTGAT
TTGAGACATTTGGAGGAAAATTTGAAGCATACAGTCAAGAATACTGTCAG
CCAAGTAGCTAAGAAAGTCTTAACCGTCGGTGCTAGTGGAGAGCTTCATC
CATCAAGATTCTGTGAGAAGGATCTGCTCAAAGCGGCTGATCGCGAACAC
GTCTTTGCATACATTGATGACCCCTGCAGTGCTACCTATCCATTGATGCA
AAAGCTAAGGCAAGTACTTGTTGAGCACGCACTGAACAATGGAGAGAACG
AGAAGACTGCCAACTCTTCAATCTTCCAGAAGATTGCAGCCTTTGAGGAG
GAATTGAAAACCGTTTTGCCGAAAGAAGTTGAGAATGCCAGGCAGACTGT
TGAGAATGGAAGTCCAACAATTCCCAACAGGATCAAAGAATGCAGGTCTT
ACCCGTTGTACAGGTTCGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACA
GGGGAAAAGTTACATCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCA
ATGTGCCAGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATG
GAATGGCGCCCCNTCCTTCAATTTGTAGTGGTTTTTATTTTGTTTAATAC
ATGGTNCTTCATCCCTTGTGTTCTGTGGTCATAGAATTTGCCATGCNAGT
CAGTG
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