EY662318

Overview
NameEY662318
Unique NameEY662318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY662318 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11
Identity = 38/112 (33.93%), Postives = 54/112 (48.21%), Query Frame = 2 
Query:   35 IAAIVSTLFYGLWNVFSGFXXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGE--TVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQRR 364
            +AAI+ +LFY  +N+FSGF              Y+  P +WTL G ++SQ+GD+ ++    G+  TV +FLKDYF F HD                       +   NFQRR
Sbjct: 1339 VAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINVFGQSTTVARFLKDYFGFHHDLLAVTAVVQIAFPIALASMFAFFVGKLNFQRR 1450
[Close]
BLAST of EY662318 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11
Identity = 35/112 (31.25%), Postives = 54/112 (48.21%), Query Frame = 2 
Query:   35 IAAIVSTLFYGLWNVFSGFXXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDT--GETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQRR 364
            +AA++S+ FY LWN+ SGF             +Y+  P+AWTL G++ SQ GD++    +     TVK+F++ YF +K +                       +K  NFQRR
Sbjct: 1315 LAAVISSAFYSLWNLLSGFLVQKPLIPVWWIWFYYICPVAWTLQGVILSQLGDVESMINEPLFHGTVKEFIEYYFGYKPNMIGVSAAVLVGFCALFFSAFALSVKYLNFQRR 1426
The following BLAST results are available for this feature:
BLAST of EY662318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
AB37G_ARATH6.175e-1133.93ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB31G_ARATH8.065e-1131.25ABC transporter G family member 31 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662318 ID=EY662318; Name=EY662318; organism=Citrus sinensis; type=EST; length=595bp
TTTCGTCGACCCACGCGTCCGCACCAAACCTTCCATCGCTGCCATTGTTT
CAACTTTATTTTATGGATTGTGGAACGTCTTTTCTGGGTTTATTATCCCA
AGACCTAGGATTCCAATATGGTGGAGATGGTACTATTGGGCCAACCCCAT
AGCTTGGACCTTGTATGGACTGGTTGCTTCGCAGTTCGGAGATATGGACG
ACAAGAAAATGGATACTGGTGAAACGGTGAAACAGTTTCTTAAGGACTAT
TTTGATTTCAAACATGATTTTCTGGGAGTAGTTGCAGCCGTTCTCGTTGT
CTTTGCAGCATTATTTGGATTTCTCTTCGCCCTAGGAATTAAGATGTTTA
ACTTCCAGAGGCGATAGTAATTCTGATAGGTACTGCTGCTGAACATGCGA
TTCAGAAGAAAAATCGCATCGCGGATGCTTTGGCTATGCTATAATCTTTT
CATGCAATGTCCCGTCAGTGTATTGTTTATTTTGATTTAGCATTTTCATT
GCTGGCATTGCAAGATATATTTTGTATACAAGATATGTTTTCTATCTTTT
TAGATTAATAAATTTTCCCTCGCCAGTCAAAAAAAAAAAAAAAAA
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