EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.682e-85
Identity = 162/234 (69.23%), Postives = 184/234 (78.63%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            KDY DPPPAPLID AEL  WS YRA+IAEF+ATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGAICGVGLVKAF    ++  GGGAN++ASGY++G+ LGAEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF    V     P    G  P   L      + D+  DD
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDD 252          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 2.323e-84
Identity = 150/197 (76.14%), Postives = 166/197 (84.26%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSD--------ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGF 740
            KDY DPPPAPLID  EL  WS YRA+IAEFVATLLFLY++VATVIG+K QSD        AC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSL+RAV Y+VAQ LGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF
Sbjct:   19 KDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGF 215          

HSP 2 Score: 33.8834 bits (76), Expect = 2.323e-84
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  757 LGPIPLPGTGINPAWSFGAAVI 822
            L  IP+ GTGINPA S GAAVI
Sbjct:  222 LATIPITGTGINPARSLGAAVI 243          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.965e-84
Identity = 160/234 (68.38%), Postives = 180/234 (76.92%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            KDY DPPPAPLID+ EL  WS YRA+IAEF+ATLLFLY++VATVIG+K QSDA        C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLIRAV Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDS +P+LAPLP+GF    V     P    G  P   L      + D+A DD
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDD 251          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.872e-84
Identity = 158/236 (66.95%), Postives = 177/236 (75.00%), Query Frame = 3
Query:  165 HHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA-------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            +  KDY DPPPAPLID  EL  WS YRA IAEF+ATLLFLY++V T+IG+K+QSD        C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RA+ YM+AQC GAICG GL K F K  YN  GGG NTV+ GYNKG+ALGAEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF    V     P    G  P          +ND+A DD
Sbjct:   14 YSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDD 249          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.127e-83
Identity = 159/234 (67.95%), Postives = 179/234 (76.50%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            KDY DPPPAPLID  EL  WS YRA+IAEF+ATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDS VP+LAPLP+GF    V     P    G  P   L      + D+A DD
Sbjct:   18 KDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDD 251          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.471e-83
Identity = 159/234 (67.95%), Postives = 179/234 (76.50%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            KDY DPPPAPLID  EL  WS YRA+IAEF+ATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDS VP+LAPLP+GF    V     P    G  P   L      + D+A DD
Sbjct:   19 KDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDD 252          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 5.591e-83
Identity = 158/232 (68.10%), Postives = 175/232 (75.43%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            +DY DPPPAP  DM EL+ W  YRA+IAEFVATLLFLYVS+ TVIG+K Q+DA      CGGVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARKVSL+R V Y+VAQCLGAICG G VKAF    Y   GGGAN +A GYNKG+ LGAEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF    V     P    G  P          +N++A DD
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDD 247          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.246e-82
Identity = 157/234 (67.09%), Postives = 180/234 (76.92%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            +DY DPPPAPL+D+ EL  WS YRA+IAEFVATLLFLYV+VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGA+CGV LVK F    Y+  GGGAN +A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF    V     P    G  P   L      +N +A  D
Sbjct:   13 RDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSD 246          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.377e-81
Identity = 156/234 (66.67%), Postives = 179/234 (76.50%), Query Frame = 3
Query:  174 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFVWSWVTWPH-PPPWNGHQPCLELWGCCYLHNDQAGDD 848
            +DY+DPPPAPL+D+ EL  WS YRALIAEFVATLLFLYV+VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARKVSL+RA+ YM AQCLGAICGV LVK F    Y+  GGGAN +A+GY+ G+ L AEIIGTFVLVYTVFSATDPKR+ARDS VP+LAPLP+GF    V     P    G  P   L      +N++A  D
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSD 249          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.835e-81
Identity = 154/233 (66.09%), Postives = 175/233 (75.11%), Query Frame = 3
Query:  171 GKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSD------ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGF-VWSWVTWPHPPPWNGHQPCLELWGCCYLHNDQAGDD 848
            GKDY+DPPP    ++ ELK WSFYRA+IAEF+ATLLFLYV+V TVIG K Q+D      AC  VGLLGI+WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLA KVSL+RAV+YMVAQCLGA CGVGLVK F    YN  GGGAN ++ GYN G  +GAEIIGTFVLVYTVFSATDPKR+ARDS +P+LAPLP+GF V+       P    G  P          +N +A DD
Sbjct:   14 GKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDD 246          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
PIP21_MAIZE2.682e-8569.23Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP23_ORYSJ2.323e-8476.14Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP22_ORYSJ2.965e-8468.38Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE3.872e-8466.95Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP24_MAIZE1.127e-8367.95Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE1.471e-8367.95Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_ARATH5.591e-8368.10Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ1.246e-8267.09Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP24_ORYSJ1.377e-8166.67Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ARATH6.835e-8166.09Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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