EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 41/102 (40.20%), Postives = 56/102 (54.90%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV 539
            +F RA+ AEF+ATLLF++  + + +       +      L IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFAEFLATLLFVFFGLGSALNWPSALPST-----LQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP2_ERIEU (Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV 539
            +F RA+  EF+ATLLF++  + + +   +   +     +L IA AFG  I  LV     ISG HINPAVT    +   +S +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFTEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQMLGHISGAHINPAVTVACLVGCHISFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV 539
            +F +A+ +EF+ATLLF++  + + +   +   +      L IA AFG  I  LV     ISG HINPAVT    +   VS +RA+ Y+ AQ LGA+ G  L+
Sbjct:    3 AFSKAVFSEFLATLLFVFFGLGSALNWPQALPSG-----LQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.923e-11
Identity = 53/181 (29.28%), Postives = 80/181 (44.20%), Query Frame = 3
Query:  252 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFV 743
            I EF+ T L ++  V  V    K + A  G+  + I W  G  + + VY TAG+SG H+NPAVT  L+        + + Y+++Q LGA     LV A  ++                E  SL G  +T      + G A   E + T +L+  + + TD        P   LAPL +G +
Sbjct:   10 IGEFLGTALLIFFGVGCVAA-LKVAGASFGLWEISIMWGMG--VALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRGP---LAPLLIGIL 184          

HSP 2 Score: 22.3274 bits (46), Expect = 5.923e-11
Identity = 15/42 (35.71%), Postives = 21/42 (50.00%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSV 876
            G++GP  L G  +NPA  FG    + +   G  L L GG  +
Sbjct:  190 GAMGP--LTGFAMNPARDFGPKFFAYLAGWG-ELALTGGREI 228          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.935e-11
Identity = 51/168 (30.36%), Postives = 78/168 (46.43%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGV---GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLG 737
            RA++AE V T +F++  VA  +       A   +    L G+A A      VLV     +SGGH+NPAVT  L     ++  R+  Y+ AQ L +     L    +++    +    +T+ SG      L  EII TF L++ V++     RS+     PLL  L +G
Sbjct:   20 RAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLAS----SLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPGFGPLLTGLIVG 183          

HSP 2 Score: 21.557 bits (44), Expect = 5.935e-11
Identity = 13/37 (35.14%), Postives = 18/37 (48.65%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVISTMTRPGMTL---DLLGGPSVG 879
            G  +NPA SFG A+ + +           L+GGP  G
Sbjct:  194 GASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAG 230          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.951e-11
Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 3
Query:  339 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKA---------FMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            G+G  G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y+VAQ +GAI     + +          +  ++ + G G ++    Y+  +AL  EI+ +   V+ +  ATD +  A  +P+P+   L L
Sbjct:   36 GIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAGFAPIPIGLALTL 175          

HSP 2 Score: 21.9422 bits (45), Expect = 5.951e-11
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  766 IPLPGTGINPAWSFGAAV 819
            IP+  T +NPA S G A+
Sbjct:  181 IPVTNTSVNPARSTGPAL 198          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.951e-11
Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 3
Query:  339 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKA---------FMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            G+G  G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y+VAQ +GAI     + +          +  ++ + G G ++    Y+  +AL  EI+ +   V+ +  ATD +  A  +P+P+   L L
Sbjct:   36 GIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAGFAPIPIGLALTL 175          

HSP 2 Score: 21.9422 bits (45), Expect = 5.951e-11
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  766 IPLPGTGINPAWSFGAAV 819
            IP+  T +NPA S G A+
Sbjct:  181 IPVTNTSVNPARSTGPAL 198          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 39/134 (29.10%), Postives = 66/134 (49.25%), Query Frame = 3
Query:  339 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGS--------ALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            G+GLLG+A AFG  +  + +    ISG H+NPAVT GL+   +        Y++AQ +G +   G++      +      G+   A+GY + S        AL +EI+ T + +  +  ATD +     +P+ +
Sbjct:   32 GIGLLGVALAFGLTVLTMAFAIGHISGCHLNPAVTVGLWAGGRFDTKDVAPYIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFAANGYGEHSPGQYSMLAALVSEIVMTMMFLIVIMGATDKRAPQGFAPIAI 165          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.738e-11
Identity = 44/145 (30.34%), Postives = 66/145 (45.52%), Query Frame = 3
Query:  339 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAI-------------CGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            G+G  G+A AFG  +  + Y    ISG H+NPAV+ GL+   +    +   Y+VAQ LGAI              G  + K F  + Y      A     GY+  +AL  E++ T   +  +  ATD +  A  +P+ +   L L
Sbjct:   32 GIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGY------AEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAGFAPLAIGLALTL 170          

HSP 2 Score: 22.3274 bits (46), Expect = 7.738e-11
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  766 IPLPGTGINPAWSFGAAV 819
            IP+  T +NPA S G A+
Sbjct:  176 IPVTNTSVNPARSTGVAL 193          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 52/170 (30.59%), Postives = 77/170 (45.29%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLY-------VSVATVIGHKKQSDACGGVGLLG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSAR 698
            S  +  IAEF+ T   ++       +++    G    +    G+GLLG       I  AFG  I   +Y    ISG HINPAVT GL+  +K      V Y++AQ LGA     +          ++GG GA     G     A+ AE +GTF+L+ T+      +R+ +
Sbjct:    3 SLTKRCIAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPK 172          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
AQP2_RABIT3.347e-1140.20Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
AQP2_ERIEU3.347e-1139.22Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=A... [more]
AQP2_ORYAF5.709e-1139.22Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
GLPF_HAEIN5.923e-1129.28Glycerol uptake facilitator protein OS=Haemophilus... [more]
TIP41_ORYSJ5.935e-1130.36Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
AQPZ_BORPA5.951e-1130.50Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR5.951e-1130.50Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQPZ_VIBPA7.457e-1129.10Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQPZ_CHRVO7.738e-1130.34Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPM_METTH9.739e-1130.59Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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