EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.989e-21
Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSDAC--GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF++TL+F++  V + I + K +        GL+ +A   G  +FV V   A ISGGH+NPAVTFGL L  +++++  V Y +AQ LGAI G  LV+        + G       SG      +  EII TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFI 179          

HSP 2 Score: 24.2534 bits (51), Expect = 1.989e-21
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  769 PLPGTGINPAWSFGAAVIS 825
            P  G  +NPA SFG AV S
Sbjct:  189 PFSGGSMNPARSFGPAVAS 207          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.660e-21
Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I + K +   A    GL+ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L    +K+  N L    + VA+G N    +  EII TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLL----LKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFI 180          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.086e-21
Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I + K +   A    GL+ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L    +K+  N L    + VA+G N    +  EII TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLL----LKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFI 180          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.629e-20
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 695
            +F +A+ AEF+ATL+F++  +A+ +             +L IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI G G++        N+ G    N++ +    G A+  E+I TF L   +FS+TD +R++
Sbjct:    9 AFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156          

HSP 2 Score: 25.409 bits (54), Expect = 1.629e-20
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSVG 879
            G L  I   G  +NPA SFG AV+     P   +  + GP VG
Sbjct:  172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWV-GPIVG 213          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.121e-20
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            RA +AEF++TL+F++    + I   K +D  A    GL+  A A    +FV V   A ISGGH+NPAVTFG+ L   ++L+R + Y +AQ LG++    L+        +   GG    A G + G    +AL  EI+ TF LVYTV+ +A DPK  +    +  +AP+ +GF+
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL--------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFI 183          

HSP 2 Score: 23.0978 bits (48), Expect = 2.121e-20
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA +FG AV+S
Sbjct:  196 GASMNPAVAFGPAVVS 211          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            S  +A ++EF+ATLLF++  V + +   K +   A    GL+ IA A    +FV V   A ISGGH+NPAVT GL +   ++LI    Y +AQCLG+I    L+  F+    N      + V++G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFI 180          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.756e-20
Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 695
            +F++A+ AEF+ATL+F++  + + +             +L I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI G G++  +     N+ G    N + +    G A+  E+I TF L   +FS+TD +R++
Sbjct:    9 AFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          

HSP 2 Score: 26.1794 bits (56), Expect = 2.756e-20
Identity = 18/46 (39.13%), Postives = 22/46 (47.83%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSVGPWL 888
            G L  I   G  +NPA SFG AV+     P   +  + GP VG  L
Sbjct:  172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWV-GPIVGAML 216          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.065e-20
Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 695
            +F++A+ AEF+ATL+F++  + + +             +L I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RA+ Y+ AQ +GAI G G++  +     N+ G    N +++    G A+  E+I TF L   +FS+TD +R++
Sbjct:    9 AFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS 156          

HSP 2 Score: 25.409 bits (54), Expect = 6.065e-20
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSVG 879
            G L  I   G  +NPA SFG AV+     P   +  + GP VG
Sbjct:  172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWV-GPIVG 213          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.073e-20
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 3
Query:  225 KLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            K+W   R L+AE + T   + + V +  G  + S +     +  IA+ FG  +  L      ISG HINPAVT G  +  ++S+I++V Y+  QC+GAI G  ++K  +    + L  G ++ +S    G A+  E + TF+LV  V   +DP R+      PL   L +
Sbjct:   21 KIW---RQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRTDIKGSAPLAVGLSI 182          

HSP 2 Score: 28.8758 bits (63), Expect = 6.073e-20
Identity = 14/27 (51.85%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTM 831
            G L  I L G  +NPA SFG AV+  M
Sbjct:  185 GHLCAIKLTGASMNPARSFGPAVVQNM 211          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.729e-20
Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANT-VASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I + +  +  A    GL+ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y VAQ LGA     L+      +Y + G    T   SG ++   +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLL------QYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFI 179          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
TIP22_ORYSJ1.989e-2137.65Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP2_TOBAC4.660e-2137.65Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC6.086e-2137.65Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQP5_PIG1.629e-2036.77Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP12_ARATH2.121e-2037.36Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP23_ARATH2.313e-2036.99Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQP5_RAT2.756e-2034.84Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE6.065e-2034.19Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP_HAEIX6.073e-2031.76Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
TIP23_MAIZE6.729e-2037.43Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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