EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A ++EF+ATLLF++  V + +   K +   A    GL+ +A A    +FV V   A ISGGH+NPAVT GL +   +++I    Y +AQCLG+I    L+  F+    N      + VA+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVFVT---NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFI 180          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19
Identity = 66/171 (38.60%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I  G      A    GL+ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA     L+  F+ H     G    T A +G ++   +  E++ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVAC-LLLGFVTH-----GKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFI 179          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.337e-19
Identity = 59/170 (34.71%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF++T +F++    + I + K ++  A    GL+  + A    +FV V   A ISGGH+NPAV FG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV+ +A DPK+      + ++AP+ +GF+
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFI 180          

HSP 2 Score: 24.2534 bits (51), Expect = 1.337e-19
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA SFG AV+S
Sbjct:  193 GASMNPAVSFGPAVVS 208          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 91.6633 bits (226), Expect = 1.337e-19
Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            + +R L+AEF+ T   + + + +  G    S       L  IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G  ++KA    E   +GG G   +A G + G  +  E + TF+LV+ V    D +R+      PL   L +
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPT-----LTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEV--VGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTDVKGSAPLAIGLSI 181          

HSP 2 Score: 26.1794 bits (56), Expect = 1.337e-19
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVI 822
            G L  I   G  +NPA SFG AV+
Sbjct:  184 GHLAAIKYTGASMNPARSFGPAVV 207          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.736e-19
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 695
            +F +A+ AEF+ATL+F++  + + +   K   A   V  L I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI G  ++     +   S     N + +    G A+ AE+I TF L   VFS+TD +R++
Sbjct:    9 AFLKAVFAEFLATLIFVFFGLGSAL---KWPSAMPSV--LQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARS-NLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          

HSP 2 Score: 24.2534 bits (51), Expect = 1.736e-19
Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVI 822
            G L  I   G  +NPA SFG AVI
Sbjct:  172 GHLVGIYFTGCSMNPARSFGPAVI 195          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.736e-19
Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIG-HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSPVPLLAPLPLGFV 743
            RA I+EF+AT +F++ +  +V+   K   D     GL+ +A A    + V V     ISGGH+NPAVTFG  +  +VSL+RAV Y VAQ LGA+    L++         +      +ASG     A+  E + TF L+Y  ++   DPKR      V  +APL +GF+
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRL----ATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFL 186          

HSP 2 Score: 25.0238 bits (53), Expect = 1.736e-19
Identity = 12/28 (42.86%), Postives = 15/28 (53.57%), Query Frame = 1
Query:  739 LCGHGSLGPIPLPGTGINPAWSFGAAVI 822
            L G   L   P  G G+NPA  FG A++
Sbjct:  186 LLGANVLAGGPFDGAGMNPARVFGPALV 213          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19
Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I  G      A    GL+ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA     L+K F+ H       G     +G ++   +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHG----VAGISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFI 179          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.935e-19
Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQ---------SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSPVPLLAPLPLGFV 743
            RA +AEF++T +F++    +++   K          ++  GG+ L+ +A A    +F  V     +SGGH+NPAVTF   +  ++S+IRA+ Y VAQ +GAI    L    ++   N L      VASG ++   L  EII TF LVY V+S A DPKR +    + ++APL +G +
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAI----LACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLI 190          

HSP 2 Score: 22.7126 bits (47), Expect = 2.935e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  769 PLPGTGINPAWSFGAAVI 822
            P  G  +NPA +FG A++
Sbjct:  200 PFDGASMNPARAFGPALV 217          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.823e-19
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            RA  AEF + ++F++    + + + K +        GL+  + +    +FV V   A +SGGH+NPAVTFG F+   ++L+RA+ Y +AQ LGA+    L+K        S GG    A +++ G    +A+  EI+ TF LVYTV+ +A DPK+      + ++APL +G +
Sbjct:   21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKV-------STGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLI 182          

HSP 2 Score: 24.2534 bits (51), Expect = 3.823e-19
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA SFG AV+S
Sbjct:  195 GASMNPAVSFGPAVVS 210          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.824e-19
Identity = 62/172 (36.05%), Postives = 95/172 (55.23%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV--ASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF++TL+F++    + +   K +   A    GL+  A A    +FV V   A ISGGH+NPAVTFG F+   ++L R + Y +AQ LG+     L++        S GG A      +G +   AL  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   21 KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRF-------STGGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFI 181          

HSP 2 Score: 23.0978 bits (48), Expect = 3.824e-19
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA SFG A++S
Sbjct:  194 GASMNPAVSFGPALVS 209          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
TIP22_ARATH1.148e-1936.47Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE1.148e-1938.60Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP1_MEDSA1.337e-1934.71Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQP_ANOGA1.337e-1932.74Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_SHEEP1.736e-1936.36Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP31_MAIZE1.736e-1936.69Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP21_ORYSJ2.557e-1937.65Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP32_ARATH2.935e-1935.59Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP13_ARATH3.823e-1934.10Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP11_ORYSJ3.824e-1936.05Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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