EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.963e-19
Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            RA I+EF+AT +F++ +  +V+      H   + +  G GL+ +A A    + V V     +SGGH+NPAVTFG  +  +VSL+RAV Y  AQ LGA+    L++           GGA      +ASG   G A+  E + TF  VY  + +  DPKR      +  +APL +GF+
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAG-GLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRL--------ATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFL 191          

HSP 2 Score: 25.0238 bits (53), Expect = 4.963e-19
Identity = 12/28 (42.86%), Postives = 15/28 (53.57%), Query Frame = 1
Query:  739 LCGHGSLGPIPLPGTGINPAWSFGAAVI 822
            L G   L   P  G G+NPA  FG A++
Sbjct:  191 LLGANVLAGGPFDGAGMNPARVFGPALV 218          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.965e-19
Identity = 53/155 (34.19%), Postives = 87/155 (56.13%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 695
            +F +A+ AEF+ATL+F++  + + +             +L IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI G G++  +     N+ G    N + +   +G A+  E+I TF L   +F++TD +R++
Sbjct:    9 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 156          

HSP 2 Score: 25.409 bits (54), Expect = 4.965e-19
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSVG 879
            G L  I   G  +NPA SFG AV+     P   +  + GP VG
Sbjct:  172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWV-GPIVG 213          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.974e-19
Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSDACGG----VGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV--ASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A  AEF++TL+F++    + +   K +   GG     GL+  A A    +FV V   A ISGGH+NPAVTFG F+   ++L R + Y VAQ LG+     L++        S GG A      +G +   AL  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   21 KAAFAEFISTLIFVFAGQGSGMAFSKLTG--GGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRF-------STGGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFI 181          

HSP 2 Score: 23.0978 bits (48), Expect = 4.974e-19
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA SFG A++S
Sbjct:  194 GASMNPAVSFGPALVS 209          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.466e-19
Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF++TL+F+     + +   K  ++ A    GL+  A A    +FV V   A ISGGH+NPAVTFG F+   ++L+R + Y +AQ LG++    +    +K     L   A  +++G    +A   EI+ TF LVYTV+ +A DPK  +    +  +AP+ +GF+
Sbjct:   21 KAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSV----VACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFI 182          

HSP 2 Score: 23.0978 bits (48), Expect = 6.466e-19
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G  +NPA +FG AV+S
Sbjct:  195 GASMNPAVAFGPAVVS 210          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.394e-19
Identity = 62/177 (35.03%), Postives = 97/177 (54.80%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQ---------SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSPVPLLAPLPLGFV 743
            RA +AEF++T +F++ +  +++   K          ++  GG+ L+ +A AF   +F  V     +SGGH+NPAVTFG  +  +V+ IRA+ Y +AQ LGAI    L    ++   N +      +ASG    + L  EII TF LVY V+S   DPKR +    + ++APL +G +
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAI----LACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLI 190          

HSP 2 Score: 22.7126 bits (47), Expect = 8.394e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  769 PLPGTGINPAWSFGAAVI 822
            P  G  +NPA +FG A++
Sbjct:  200 PFSGASMNPARAFGPALV 217          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            +A +AEF+ATLLF++  V + I  G      A    GL+ IA A    +FV V   A  SGGH+NPAVTFGL +   ++++  + Y VAQ LGA     L++ F+ H         + V+ G  +   +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ +GF+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR-FVTH---GKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFI 180          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YM AQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ Y+VAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF A+L +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.064e-18
Identity = 59/170 (34.71%), Postives = 92/170 (54.12%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSPVPLLAPLPLGFV 743
            RA +AEF +T +F++    + +   K  Q  A     LL +A A    +F  V  +  +SGGH+NPAV+FG  +  ++S+IRAV Y +AQ LG+I    +++       N++      V+ G   G     E++ TF L+YTV+ +A DPKR A    V  +APL +G +
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVT----NNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLI 182          

HSP 2 Score: 20.7866 bits (42), Expect = 4.064e-18
Identity = 7/18 (38.89%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  769 PLPGTGINPAWSFGAAVI 822
            P  G  +NPA +FG +++
Sbjct:  192 PFDGACMNPALAFGPSLV 209          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
TIP32_MAIZE4.963e-1935.59Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQP5_HUMAN4.965e-1934.19Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP11_MAIZE4.974e-1936.78Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP11_ARATH6.466e-1934.71Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP31_ARATH8.394e-1935.03Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP22_MAIZE1.269e-1837.06Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_RABIT1.269e-1835.12Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_SHEEP2.165e-1835.12Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN2.827e-1835.12Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIPA_PHAVU4.064e-1834.71Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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