EY662311

Overview
NameEY662311
Unique NameEY662311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662311_ssr92 microsatellite EY662311_ssr92:92..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY662311_ssr112 microsatellite EY662311_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18
Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  Y+ AQ LGA+ G  ++ +             NT+ +G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  219 ELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            EL+  SF+RA+ AEF ATL +++  + + +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  Y+ AQ LGA+ G  ++ +             NT+ +G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRW-----APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVAL 160          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  +   +         G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRWTP-----GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.160e-17
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  + + +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+    + G A   EI  T   V  +F+  D +R+ +   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGSSLRW-----APGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVAL 162          

HSP 2 Score: 22.3274 bits (46), Expect = 1.160e-17
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  778 GTGINPAWSFGAAVIS 825
            G G+NPA SF  A+++
Sbjct:  180 GAGMNPARSFAPAILT 195          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.160e-17
Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIG-HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSPVPLLAPLPLGFV 743
            RA I+EF+AT +F++ +  +++   K   D     GL+ ++ A    + V V     ISGGH+NPA+TFG  L  ++SLIRA+ Y +AQ LGA+    L++         +      +ASG     A+  E   TF L+Y  ++   DPKR      V  +APL +GF+
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRL----TTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFL 187          

HSP 2 Score: 26.5646 bits (57), Expect = 1.160e-17
Identity = 19/50 (38.00%), Postives = 22/50 (44.00%), Query Frame = 1
Query:  739 LCGHGSLGPIPLPGTGINPAWSFGAAVISTMTRPGMTLDLLGGPSVGPWL 888
            L G   L   P  G G+NPA  FG A++    R      L  GP VG  L
Sbjct:  187 LLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL--GPFVGAGL 234          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.163e-17
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 3
Query:  234 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGG---VGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPL 734
            + +R L+AEF+ T   + + + + +G        GG     +  IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI G  L+KA    +   +GG G   +      G  +  E + TF+LV+ V    D +RS      PL   L +
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGW-------GGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV--IGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIGLSI 182          

HSP 2 Score: 26.1794 bits (56), Expect = 1.163e-17
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  751 GSLGPIPLPGTGINPAWSFGAAVI 822
            G L  I   G  +NPA SFG AV+
Sbjct:  185 GHLSAIKYTGASMNPARSFGPAVV 208          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGF 740
            M EL+  SF+RA++AEF+ +LL+  + +   +       A G  G+LG A AFG     LV     +SGGHINPA+T    LA ++SL RA+ Y++AQ LGA+ G G++          +LG  A   + G  +G+ +  E++ T   +  VF++ D +   R    P  A LP+GF
Sbjct:    1 MRELRSSSFWRAILAEFLGSLLYTLLGLGASLRW-----APGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVV--ELLLTAQFILCVFASFDDRHDGR----PGSAALPVGF 166          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.509e-17
Identity = 61/172 (35.47%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  243 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVG-LLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPLLAPLPLGFV 743
            RA ++EFVAT +F++ +  +V G  K     G +G LL +A A    +   V  +   SGGH+NPAVTFG+ + R++S  RA  Y  AQ LGA+  V L++           GG      T+    ++  AL  E++ TF LVYTV++    +RS        +APL +G V
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLV 188          

HSP 2 Score: 23.0978 bits (48), Expect = 1.509e-17
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 1
Query:  739 LCGHGSLGPIPLPGTGINPAWSFGAAVI 822
            + G   L   P  G  +NPA +FG A++
Sbjct:  188 VAGANILAGGPFDGAAMNPARAFGPALV 215          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 58/168 (34.52%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M EL+  SF+RA+ AEF ATL +++  +   +       A G + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+ +G +   A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162          
BLAST of EY662311 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 55/168 (32.74%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  213 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSPVPL 716
            M E + +SF+RA+ AEF  T+ +++  +   +       A G   +L IA AFG ++  +V     +SG HINPAVTF   +  ++SL RA+ Y+ AQ LGA+ G  ++               NT+  G + G A   EI  T   V  +F+  D +R+ R   V L
Sbjct:    1 MWEFRSFSFWRAVFAEFFGTMFYVFFGLGASLKW-----AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVSL 162          
The following BLAST results are available for this feature:
BLAST of EY662311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
MIP_MOUSE6.298e-1834.52Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_RAT8.225e-1834.34Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_CANFA8.225e-1834.52Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_HUMAN1.160e-1733.93Lens fiber major intrinsic protein OS=Homo sapiens... [more]
TIP31_ORYSJ1.160e-1734.32Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQP_AEDAE1.163e-1730.99Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
MIP_CHICK1.403e-1735.59Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP32_ORYSJ1.509e-1735.47Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
MIP_CAVPO3.126e-1734.52Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_RANPI4.082e-1732.74Lens fiber major intrinsic protein OS=Rana pipiens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662311 ID=EY662311; Name=EY662311; organism=Citrus sinensis; type=EST; length=901bp
TTTTCGAACAGGGGGCGTCCGAGCTTTTCTCACACCAGAGAGGGTGTGTG
CTTTTCTTTGATTGTTCCAAAGAGAAATCAAAATTTTGTGCAGAAGAAGA
AGAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGAC
AAACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCA
CCACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCT
CATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCA
CTGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTT
TTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTG
CACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGC
TGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTG
GCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCAT
GAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTG
GCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTG
CTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGA
CTCTCCCGTGCCCCTTTTGGCTCCACTTCCATTGGGATTTGTGTGGTCAT
GGGTCACTTGGCCCCATCCCCCTCCCTGGAACGGGCATCAACCCTGCCTG
GAGCTTTGGGGCTGCTGTTATCTCCACAATGACCAGGCCGGGGATGACCT
TGGATCTTCTGGGTGGTCCTTCCGTGGGACCTTGGCTGCCGCGGAATACA
A
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