EY662284

Overview
NameEY662284
Unique NameEY662284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.567e-40
Identity = 101/239 (42.26%), Postives = 136/239 (56.90%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP--HSKATKRHCPFWANPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            IVA+ND     K A ++L+YDST G F+  +   G+D + V+GK ++  + R+P  +PW + G D ++E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN ++Y     +ISNASCTTNCLAP  KV+   F I++G MTT HSYT  Q                   NI P+STGAAKAV  V+P  + K T          NVSVVDL  ++ K  S  +     +KA
Sbjct:   29 IVAVNDPFIEPKYAEYMLRYDSTHGNFKGTIAVEGSD-LVVNGKKVKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMYVMGVNNESYDGSANVISNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRV-PTANVSVVDLTVRIEKGASYDEIKEVVKKA 264          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.567e-40
Identity = 92/196 (46.94%), Postives = 119/196 (60.71%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHS 698
            +VAIND    +  +HLLKYDS  G  +  +  V  + + +D K + V S ++P NLPW +  ID+VIE TG FV  EGA  H++AGAK+V+I+AP K   I T V  VN      D+ IIS ASCTTNCLAP V VL++ FGI+ GTM T H+YT DQ                  NI PT+TGAAKA+ LV+P +
Sbjct:   34 VVAINDLTQPEVLAHLLKYDSAHGELKRKIT-VKQNILQIDRKKVYVFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYNVNHKTISSDDKIISAASCTTNCLAPLVHVLEKNFGIVYGTMLTVHAYTADQRLQDAPHNDLRRARAAAVNIVPTTTGAAKAIGLVVPEA 228          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.567e-40
Identity = 103/239 (43.10%), Postives = 134/239 (56.07%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPF-WANPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            +VAIND    +    ++ KYDST G F+  V+    DG + ++GK I V   R+P  +PWG  G D V+E TGVF   E A  H++ GAKKV+I+AP   D P +V GVN +AYKP+  +ISNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI P+STGAAKAV  V+P          F     +VSVVDLV ++ K  S  +     +KA
Sbjct:   29 VVAINDPFIDLDYMVYMFKYDSTHGRFKGKVET--KDGKLVIEGKPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPS-ADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRIPTSDVSVVDLVVRLEKGASYDQIKEVIKKA 264          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.567e-40
Identity = 97/225 (43.11%), Postives = 132/225 (58.67%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP--HSKATKRHCPFWANPNVSVVDLVPQVSK 776
            +VA+ND     + A+++LKYDS+ G+F+ ++K    DG+ V+GK ++  + R+P  +PW   G + ++E TGVF   E A  H+  GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV+  K+ I++G MTT HSYT  Q                   NI P+STGAAKAV  V+P  + K T         PNVSVVDL  ++ K
Sbjct:   29 VVAVNDPFIDPEYAAYMLKYDSSHGVFKGEIKK-DADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPS-ADAPMYVMGVNEKTYDGKADVISNASCTTNCLAPLAKVIHDKYTIVEGLMTTVHSYTATQKTVDGPSGKDWRGGRGAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRV-PTPNVSVVDLTVRIEK 250          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.567e-40
Identity = 97/224 (43.30%), Postives = 131/224 (58.48%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            +VAIND    ++  +++ KYDST G F+  V+ +    + +DG  I V + R+P ++ W   G D VIE TGVF  +E A  H++ GAK+V+I+AP K D P YVVGVN + + P E +ISNASCTTNCLAP  KV++  FGI +G MTT H+ T  Q                   NI P+STGAAKAV  V+P          F    P+VSVVDL  +++K
Sbjct:   30 VVAINDPFIDLEYMAYMFKYDSTHGRFDGSVE-IKDGKLVIDGNAIDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSK-DAPMYVVGVNEEKFNPSEKVISNASCTTNCLAPLAKVINDTFGIEEGLMTTVHATTATQKTVDGPSKKDWRGGRGASANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVKLAK 251          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.658e-40
Identity = 97/225 (43.11%), Postives = 131/225 (58.22%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP--HSKATKRHCPFWANPNVSVVDLVPQVSK 776
            +VA+ND       A+++LKYDST G F+  ++    +G+ V+GK I+  + R+P  +PWG  G   ++E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN   YK D  ++SNASCTTNCLAP  KV++  FG+++G MTT HSYT  Q                   NI P+STGAAKAV  V+P  + K T          NVSVVDL  +  K
Sbjct:   30 VVAVNDPFIETHYAAYMLKYDSTHGRFQGTIETYD-EGLIVNGKKIRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNKEYKTDINVLSNASCTTNCLAPLAKVINDNFGLVEGLMTTVHSYTATQKTVDAPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRV-PTANVSVVDLTCRTEK 251          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 4.658e-40
Identity = 101/225 (44.89%), Postives = 129/225 (57.33%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKK 779
            +VA+ND       A++++KYDST G ++  V       I +DG  I     R+P NLPWG L ID+ ++ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN   Y PD+ I+SNASCTTNCLAP  KV++  FGI +G MTT HS T  Q                   NI P+STGAAKAV  VLP  +       F     +VSVVDL  ++ K+
Sbjct:   28 VVAVNDPFISNDYAAYMVKYDSTHGRYKGTVSH-DDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAPSSS-APMFVVGVNHTKYTPDKKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLEKE 250          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.658e-40
Identity = 90/195 (46.15%), Postives = 115/195 (58.97%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VA+ND       +HLLKYD+  G F  +V+ +   G  V+GK I+     +   LPWGDL ID+V+E TG + D+E A  HI AGAKKVLI+AP KGD+ T V   N D     E ++S ASCTTN LAP  KVL  +FG+++G MTT H+YTGDQ                    NI P STGAAKA+  V+P
Sbjct:   29 VVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVI-EGGFRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFGLVEGFMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIP 222          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.658e-40
Identity = 90/195 (46.15%), Postives = 115/195 (58.97%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VA+ND       +HLLKYD+  G F  +V+ +   G  V+GK I+     +   LPWGDL ID+V+E TG + D+E A  HI AGAKKVLI+AP KGD+ T V   N D     E ++S ASCTTN LAP  KVL  +FG+++G MTT H+YTGDQ                    NI P STGAAKA+  V+P
Sbjct:   29 VVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVI-EGGFRVNGKEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFGLVEGFMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIP 222          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.658e-40
Identity = 104/245 (42.45%), Postives = 135/245 (55.10%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKKPSQKKWTPPFEKALT*TEK 836
            +VAIND    +    ++LKYD+  G F+  V+    DG + V+G  I V + R+P ++PWG  G D V+E TGVF   E A  H++ GAKKV+I+AP   D P +V GVN +AYK +  +ISNASCTTNCLAP  KV++  FGI  G MTT H+ T  Q                   NI P+STGAAKAV  V+P          F    P+VSVVDL   +SK  S  +     +KA   T K
Sbjct:   29 VVAINDPFIPLDYMVYMLKYDTVHGRFDGSVE--AKDGKLVVNGHAIAVSAERDPTSIPWGSAGADYVVESTGVFTTTEAASAHLKGGAKKVIISAPS-ADAPMFVCGVNLEAYKSEYKVISNASCTTNCLAPLAKVINDNFGIADGLMTTVHATTATQKTVDGPSHKDWRGGRAAAANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVNLSKGASYDEIKQAIKKASETTMK 270          
The following BLAST results are available for this feature:
BLAST of EY662284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_SORMA3.567e-4042.26Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P_MYCGE3.567e-4046.94Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_CRYCU3.567e-4043.10Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_CLAPU3.567e-4043.11Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P1_SCHPO3.567e-4043.30Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_ASPOR4.658e-4043.11Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P1_YEAST4.658e-4044.89Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P1_STAES4.658e-4046.15Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAEQ4.658e-4046.15Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_RHIRA4.658e-4042.45Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662284 ID=EY662284; Name=EY662284; organism=Citrus sinensis; type=EST; length=927bp
CCTGGTCGCCTGATGTACCGGTCCGGAATTCTTTCTAAAAGAGGCGTCCG
GTTTGGTAGTGGCGGTAAGAACTTCTTGAGGTGCTGGCACGGCCGCAAGG
ACTCTCCACTTGAATCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGG
CCTCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGAT
GTTAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCA
GGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCA
TCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCG
GGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGG
CAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACA
AGCCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTT
GCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAAC
CATGACCACCACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTA
GCCACCGTGACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGGTCCA
ACATCAACTGGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCGCACTCCAA
GGCAACTAAACGGCATTGCCCTTTCTGGGCCAACCCAAACGTCTCCGTTG
TTGATCTTGTCCCTCAAGTGTCGAAAAAACCTTCGCAGAAGAAGTGGACC
CCGCCTTTCGAGAAAGCGCTGACATGAACTGAAAAGATACTCTCCCTGGG
CAACAAGCCCTCGCTTTCGGCGACTTCGGTGCTCTGATGTTCCCCACCCG
TGATCATCCCCCAACTTGGCAGGGAGA
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