EY662284

Overview
NameEY662284
Unique NameEY662284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 84/227 (37.00%), Postives = 117/227 (51.54%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSK----ATKRHCPFWANPNVSVVDLVPQVSKK 779
            IVAIN+    +   HL +YD+T G F+  VK  G D + +    I +++  +   LPW +L ID+V E TG  +DR+    HI AGAK+VLI+ P   D+  T V GVN D  + +  +ISNASCTTNC+ P + VLD+ F +  G +TT HS   DQ                  +I P  T  A+ +  +LPH K    A     P     NV+ +DL   + KK
Sbjct:   31 IVAINELAKPEAICHLTQYDTTHGRFKHTVKLNG-DQLLIGDDSILLLNQPDANLLPWAELDIDIVYEATGSLIDRQACEAHIHAGAKQVLISHPSSADVDETIVYGVNHDLLRAEHTVISNASCTTNCIVPVIDVLDKHFEVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVP---TINVTAIDLSVTLEKK 253          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SALAR (D-erythrose-4-phosphate dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=epd PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 74/194 (38.14%), Postives = 109/194 (56.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VAIN+       +HLLKYD++ G F  +V+    + + V   VI+++  +   +LPW +LG+D+V++ TGV+ +RE    HI AGAKKVL + PG  D+  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I P  T  A  +  + P
Sbjct:   32 VVAINELADAAGMAHLLKYDTSHGRFAWEVRHE-REQLFVGDDVIRILHEQTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFP 224          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_TREPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Treponema pallidum GN=gap PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 93/233 (39.91%), Postives = 122/233 (52.36%), Query Frame = 3
Query:  153 SHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN--PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-----IPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKV-LDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            ++ LKYDS  G   + +     D + V G  I+ V  R   P  LPW DLGI++VIE TG++ +    G H++AGAK+V+I+AP K       + T V+GVN   + P E  ++SNASCTTNCLAP V V L +  GI  G MTT HSYT  Q                   NI P++TGAAKAV  VLP ++       F    P  SVVDL  +  K+ S        +KA
Sbjct:   45 AYQLKYDSVQGKMGSSLSAPAEDILEVGGHRIKCVCGRGLKPSQLPWKDLGIEVVIEATGIYANESSYG-HLEAGAKRVIISAPAKSSDASKPVKTIVMGVNEHEFDPAEHKVVSNASCTTNCLAPVVHVFLKEGVGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGEVLPSTRGKLTGMAFRVPTPTGSVVDLTFRTEKETSVADLNAMLKKA 276          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SALG2 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=epd PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 84/240 (35.00%), Postives = 123/240 (51.25%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP----HSKATKRHCPFWANPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            +VAIN+       +HLLKYD++ G F  +V+    + + V   VI+++  R   +LPW +LG+D+V++ TGV+ +RE    HI AGAKKVL + PG   +  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I P  T  A  +  + P      +A     P     NV+ +DL   V K     +     +KA
Sbjct:   32 VVAINELADAAGMAHLLKYDTSHGRFAWEVRHE-REQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNGLDATVVFGVNQNELRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVP---TINVTAIDLSVTVKKPVKASEVNQLLQKA 267          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_ECO7I (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 76/194 (39.18%), Postives = 106/194 (54.64%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VAIN+       +HLLKYD++ G F  +V+    D + V    I+V+   +  +LPW +LG+D+V++ TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I P  T  A  +    P
Sbjct:   32 VVAINELADAAGMAHLLKYDTSHGRFAWEVRQE-RDQLFVGDDAIRVLHEHSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFP 224          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.805e-31
Identity = 80/227 (35.24%), Postives = 117/227 (51.54%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSK----ATKRHCPFWANPNVSVVDLVPQVSKK 779
            IVAIN+    +   HL +YD+T G F++    +  + +++    IQ++   +   LPW  L ID+V E TG  +DR+    HI+AGAK+VLI+ P  GD+  T V GVN    K +  ++SNASCTTNCL P ++VLD+ F +  G +TT HS   DQ                  +I P  T  A+ +  +LP  K    A     P     NV+ +DL   + K+
Sbjct:   31 IVAINELANPEAMLHLTQYDTTHGRFQSPAS-LDANVMTIGDDRIQLLHEADAEKLPWRSLDIDIVFEATGALIDRQACEAHIRAGAKQVLISHPSSGDVDATIVYGVNHQDLKAEHKVVSNASCTTNCLVPIIQVLDRAFKVRSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPEMKDKFEAISVRVP---TINVTAIDLSVTLDKR 253          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SALPK (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=epd PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.150e-30
Identity = 83/240 (34.58%), Postives = 123/240 (51.25%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP----HSKATKRHCPFWANPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            +VAIN+       +HLLKYD++ G F  +V+    + + V   VI+++  R   +LPW +LG+D+V++ TGV+ ++E    HI AGAKKVL + PG  D+  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+T  HS   DQ                  +I P  T  A  +  + P      +A     P     NV+ +DL   V K     +     +KA
Sbjct:   32 VVAINELADAAGMAHLLKYDTSHGRFAWEVRHE-REQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNQEHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTAIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVP---TINVTAIDLSVTVKKPVKASEVNQLLQKA 267          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_SALPA (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A GN=epd PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.150e-30
Identity = 83/240 (34.58%), Postives = 123/240 (51.25%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP----HSKATKRHCPFWANPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            +VAIN+       +HLLKYD++ G F  +V+    + + V   VI+++  R   +LPW +LG+D+V++ TGV+ ++E    HI AGAKKVL + PG  D+  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+T  HS   DQ                  +I P  T  A  +  + P      +A     P     NV+ +DL   V K     +     +KA
Sbjct:   32 VVAINELADAAGMAHLLKYDTSHGRFAWEVRHE-REQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNQEHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTAIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVP---TINVTAIDLSVTVKKPVKASEVNQLLQKA 267          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_YERE8 (D-erythrose-4-phosphate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=epd PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VAIN+    +  +HLLKYDS+ G F  DV+    D + V   +I+++       LPWG+LGID+V++ +GV+  R     H+ +GAKKVL   PG  D+  T V GVN    + D  I+SNASCTTNC+ P +++LD  FGI  GT+TT HS   DQ                  +I P  T  A  +  + P
Sbjct:   32 VVAINELANAEGMAHLLKYDSSHGRFAWDVRQE-CDKLYVGDDIIRLIHQPEIEQLPWGELGIDVVLDCSGVYGSRADGEAHLTSGAKKVLFAHPGGHDLDATVVYGVNHQDLQADHRIVSNASCTTNCIIPIIQLLDVAFGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFP 224          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_PECCP (D-erythrose-4-phosphate dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=epd PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 82/226 (36.28%), Postives = 116/226 (51.33%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP----HSKATKRHCPFWANPNVSVVDLVPQVSK 776
            +VAIN+    +  +HLLKYDS+ G F  DV+    D + V    I+++       LPW +LG+D+V++ +GV+  RE    H+ AGAKKVL + PG  D+  T V GVN    + +  I+SNASCTTNC+ P +K+LD  FGI  GT+TT HS   DQ                  +I P  T  +  +  + P      +A     P     NV+ +DL   V K
Sbjct:   32 VVAINELASAEGMAHLLKYDSSHGRFSWDVRQE-CDQLYVGDDCIRLLHQAEIQALPWRELGVDIVLDCSGVYGSREDGEAHLAAGAKKVLFSHPGTADLDATVVFGVNHQQLEREHRIVSNASCTTNCIIPVIKLLDDAFGIENGTVTTIHSSMNDQPVIDAYHHDLRRTRAASQSIIPVDTKLSAGITRIFPQFVDRFEAISVRVP---TINVTAIDLSVSVRK 253          
The following BLAST results are available for this feature:
BLAST of EY662284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_SHEFN3.026e-3137.00D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SALAR3.952e-3138.14D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
G3P_TREPA5.162e-3139.91Glyceraldehyde-3-phosphate dehydrogenase OS=Trepon... [more]
E4PD_SALG26.742e-3135.00D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_ECO7I6.742e-3139.18D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_SHELP8.805e-3135.24D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SALPK1.150e-3034.58D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALPA1.150e-3034.58D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_YERE81.502e-3038.66D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_PECCP2.562e-3036.28D-erythrose-4-phosphate dehydrogenase OS=Pectobact... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662284 ID=EY662284; Name=EY662284; organism=Citrus sinensis; type=EST; length=927bp
CCTGGTCGCCTGATGTACCGGTCCGGAATTCTTTCTAAAAGAGGCGTCCG
GTTTGGTAGTGGCGGTAAGAACTTCTTGAGGTGCTGGCACGGCCGCAAGG
ACTCTCCACTTGAATCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGG
CCTCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGAT
GTTAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCA
GGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCA
TCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCG
GGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGG
CAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACA
AGCCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTT
GCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAAC
CATGACCACCACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTA
GCCACCGTGACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGGTCCA
ACATCAACTGGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCGCACTCCAA
GGCAACTAAACGGCATTGCCCTTTCTGGGCCAACCCAAACGTCTCCGTTG
TTGATCTTGTCCCTCAAGTGTCGAAAAAACCTTCGCAGAAGAAGTGGACC
CCGCCTTTCGAGAAAGCGCTGACATGAACTGAAAAGATACTCTCCCTGGG
CAACAAGCCCTCGCTTTCGGCGACTTCGGTGCTCTGATGTTCCCCACCCG
TGATCATCCCCCAACTTGGCAGGGAGA
back to top