EY662284

Overview
NameEY662284
Unique NameEY662284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_IDILO (D-erythrose-4-phosphate dehydrogenase OS=Idiomarina loihiensis GN=epd PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.931e-26
Identity = 69/195 (35.38%), Postives = 97/195 (49.74%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPH 695
            +V IN+    +  +HLLKYDS+ G F   V   G D ++V G  I +        + W    +D V++ TGVF  +     ++Q G K+VL + PGK D+  T + GVN      D  ++SN SCTTNC+ P +KVLD  FGI  G +TT HS   DQ                  +I P  T  A+ +  +LPH
Sbjct:   34 VVLINEPAASEAIAHLLKYDSSHGRFGEKVTQSG-DALTVAGDNIALTHQTEIEAIDWRAHEVDFVVDCTGVFGSQADGQLYLQQGVKRVLFSHPGKPDVDFTAIYGVNEKELTVDHKVVSNGSCTTNCIVPVIKVLDDAFGIDSGAITTIHSAMHDQQVIDAYHPDLRRTRAAGRSIIPVDTRLARGIERILPH 227          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_COLP3 (D-erythrose-4-phosphate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=epd PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.828e-26
Identity = 69/197 (35.03%), Postives = 99/197 (50.25%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSK 701
            +V+IN+       +HLLKYDST G F   V       I ++G  I +    N  +LPW    ID+V++ TG + ++     HI  GAKKVL + PG  DI  T + G+N       + ++SN SCTTNC+ P +KV+D+ FG+  G++TT HS   DQ                  +I P  T  A  +  +LP  K
Sbjct:   32 LVSINELAPASGIAHLLKYDSTHGRFPFSVSEKENQLI-INGDEIALTHIGNLNSLPWQQQNIDIVLDCTGKYGNKADGLSHINRGAKKVLFSHPGSQDIDATIIYGINHQTLTSSDRVVSNGSCTTNCIVPVIKVIDEAFGVESGSITTIHSSMHDQQVIDAYHKDLRLSRAASQSIIPVDTKLAAGIERILPKFK 227          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_VIBVY (D-erythrose-4-phosphate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.000e-26
Identity = 75/207 (36.23%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIF-------------EADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VA+N+    +  +HLL+YD++ G F               D  P G      D   I  +S  N   LPW DL +DLV++ TGVF  +    +HI+AGAKKVL + PG  D+  T + GVN +  K +  ++SN SCTTNC+ P +KVLD+ FGI  GT+TT HS   DQ                  +I P  T   K +  + P
Sbjct:   31 VVAVNELAQPEAMAHLLQYDTSHGRFGKRISHDQEHLYVHHDACPQGKG--EFDSIRILHLSEINL--LPWRDLEVDLVLDCTGVFGCQADGLEHIKAGAKKVLFSHPGASDLDNTIIYGVNHETLKAEHNVVSNGSCTTNCIVPIIKVLDEAFGIESGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFP 233          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_VIBVU (D-erythrose-4-phosphate dehydrogenase OS=Vibrio vulnificus GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.000e-26
Identity = 75/207 (36.23%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIF-------------EADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VA+N+    +  +HLL+YD++ G F               D  P G      D   I  +S  N   LPW DL +DLV++ TGVF  +    +HI+AGAKKVL + PG  D+  T + GVN +  K +  ++SN SCTTNC+ P +KVLD+ FGI  GT+TT HS   DQ                  +I P  T   K +  + P
Sbjct:   31 VVAVNELAQPEAMAHLLQYDTSHGRFGKRISHDQEHLYVHHDACPQGKG--EFDSIRILHLSEINL--LPWRDLEVDLVLDCTGVFGCQADGLEHIKAGAKKVLFSHPGASDLDNTIIYGVNHETLKAEHNVVSNGSCTTNCIVPIIKVLDEAFGIESGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFP 233          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_EDWI9 (D-erythrose-4-phosphate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=epd PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.114e-25
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLP 692
            +VAIN+    +  +HLL+YD+  G F   V+    D + +    I+++      +LPW  L +D+V+E +GV+  R     H+ AGA KVL + PG  D+  T V GVN ++   +  I+SNASCTTNC+ P +K+LD  F I  G +TT HS   DQ                  +I P  T  A  +A VLP
Sbjct:   32 VVAINELAAAEGMAHLLQYDTCHGRFAWSVRQQD-DWLWIGDDRIRLLHRPQIADLPWEALQVDVVLECSGVYGSRADGEAHLLAGAGKVLFSHPGGHDLDATVVYGVNQESLLAEHRIVSNASCTTNCIIPVIKLLDDAFAIESGAVTTIHSSMNDQQVIDAYHPDLRRTRAASHSIIPVDTKLAAGIARVLP 224          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: E4PD_PSYIN (D-erythrose-4-phosphate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=epd PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.232e-24
Identity = 78/224 (34.82%), Postives = 107/224 (47.77%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWANP--NVSVVDLVPQVSK 776
            +V IN+       +HL +YDST G F   V  +  + + +    I +V      +LPW +  ID+V++ TG++  R  A  HI AGAKKV+ + P   D+  T V G+N      DE  IS ASCTTNC+ P +  LD+ F I  GT+TT HS   DQ                  +I P  T  A  +  +LP   A K        P  NV+ +DL   VSK
Sbjct:   32 VVVINELAEPSAIAHLTQYDSTHGRFPFPVN-LQNNLLKIKNDDIHLVRFSELADLPWHEHDIDIVLDCTGIYGSRADADAHIAAGAKKVIFSHPADPDVDATVVYGINHQQLTGDETFISGASCTTNCMVPVIDTLDKHFAIKCGTITTIHSAMNDQPVIDAYHSDLRRTRAASQSIIPVDTKLAAGIERILP-KFANKFEAIAVRVPTINVTAMDLSITVSK 253          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 82/230 (35.65%), Postives = 124/230 (53.91%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKR-HCPFWANPNVSVVDLVPQVSKK 779
            ++ IND    +  ++LL++DST G+   +V+         +GK+I + S   PV     DL G+ ++IE +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP   +LD+ F I +G +TT HSYT DQ                   NI PT+T AA A+  VLP+ K     H     + +VS++DL   + KK
Sbjct:   31 VIGINDPANWEILAYLLEHDSTHGLLNKEVR-------YSNGKLI-IGSLEIPVFNSIKDLKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKK 251          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.721e-22
Identity = 79/230 (34.35%), Postives = 120/230 (52.17%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKR-HCPFWANPNVSVVDLVPQVSKK 779
            ++ IND    +  ++LL++DS  G+   +V+             + + S   PV     DL G+D++IE +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP   +LD+ F I +G +TT HSYT DQ                   NI PT+T AA A+  VLP+ K     H     + +VS++DL   + KK
Sbjct:   31 VIGINDPANWEILAYLLEHDSVHGLLPKEVR--------YSNYKLIIGSLEIPVFNSIKDLKGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAIAPICAILDKAFKIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKK 251          
The following BLAST results are available for this feature:
BLAST of EY662284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_IDILO2.931e-2635.38D-erythrose-4-phosphate dehydrogenase OS=Idiomarin... [more]
E4PD_COLP33.828e-2635.03D-erythrose-4-phosphate dehydrogenase OS=Colwellia... [more]
E4PD_VIBVY5.000e-2636.23D-erythrose-4-phosphate dehydrogenase OS=Vibrio vu... [more]
E4PD_VIBVU5.000e-2636.23D-erythrose-4-phosphate dehydrogenase OS=Vibrio vu... [more]
E4PD_EDWI91.114e-2536.08D-erythrose-4-phosphate dehydrogenase OS=Edwardsie... [more]
E4PD_PSYIN1.232e-2434.82D-erythrose-4-phosphate dehydrogenase OS=Psychromo... [more]
G3P_HELPJ6.758e-2335.65Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_HELPY5.721e-2234.35Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662284 ID=EY662284; Name=EY662284; organism=Citrus sinensis; type=EST; length=927bp
CCTGGTCGCCTGATGTACCGGTCCGGAATTCTTTCTAAAAGAGGCGTCCG
GTTTGGTAGTGGCGGTAAGAACTTCTTGAGGTGCTGGCACGGCCGCAAGG
ACTCTCCACTTGAATCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGG
CCTCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGAT
GTTAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCA
GGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCA
TCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCG
GGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGG
CAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACA
AGCCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTT
GCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAAC
CATGACCACCACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTA
GCCACCGTGACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGGTCCA
ACATCAACTGGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCGCACTCCAA
GGCAACTAAACGGCATTGCCCTTTCTGGGCCAACCCAAACGTCTCCGTTG
TTGATCTTGTCCCTCAAGTGTCGAAAAAACCTTCGCAGAAGAAGTGGACC
CCGCCTTTCGAGAAAGCGCTGACATGAACTGAAAAGATACTCTCCCTGGG
CAACAAGCCCTCGCTTTCGGCGACTTCGGTGCTCTGATGTTCCCCACCCG
TGATCATCCCCCAACTTGGCAGGGAGA
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