EY662284

Overview
NameEY662284
Unique NameEY662284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.879e-43
Identity = 104/231 (45.02%), Postives = 135/231 (58.44%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPH----SKATKRHCPFWANPNVSVVDLVPQVSKKPSQKK 794
            +VAIND G V+  +HL ++DS  G F  +VK  G D I V    I+V + RNP  LP  +LG+D+ +E TG+F  R+ A  H+ AGAK+VL++AP  G   T V GVN +    +  ++SNASCTTNCLAP  KVL+   GI KG MTT H+YTGDQ                  ++ PTSTGAAKAV LVLP        T    P    PNVSV+DL   V+K+ + K+
Sbjct:   31 VVAINDLGPVETNAHLFRFDSVHGRFPGEVKVAG-DTIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNEHLVVSNASCTTNCLAPVAKVLNDAVGIEKGFMTTIHAYTGDQPTLDTMHKDLYRARAAAMSMIPTSTGAAKAVGLVLPELAGKLDGTSIRVP---TPNVSVIDL-KFVAKRATSKE 256          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.879e-43
Identity = 102/226 (45.13%), Postives = 136/226 (60.18%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKKPS 785
            +VAIND       +++LKYDS  G F+ +V   G   + V+GK I++ + ++P  L WG++G D+V+E TG+F+ +EGA KHI AGAKKV+++AP K D P +V GVN   YK  E IISNASCTTNCLAP  KVL+ K+GI +G MTT H+ T  Q                   NI P+STGAAKAV +V+P          F     +VSVVDL  ++ K  S
Sbjct:   30 VVAINDLLEPDYLAYMLKYDSVHGRFDGEVSVDGNT-LVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYK-GEAIISNASCTTNCLAPVAKVLNDKWGIKRGLMTTVHAATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGVVIPQLNKKLTGMSFRVPTSDVSVVDLTVELEKAAS 253          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.879e-43
Identity = 105/238 (44.12%), Postives = 141/238 (59.24%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKKPSQKKWTPPFEKA 818
            +VA+ND    V  A+++ KYDST G ++ +V   G D + +DG  I V   ++P NLPWG LG+D+VI+ TGVF + + A KH+ AGAKKV+ITAP K   P +VVGVN D Y   E I+SNASCTTNCLAP  K+++ +FGI +  MTT HS T  Q                   NI P+STGAAKAV  VLP  +       F     +VSVVDL  +++K+ +  +     +KA
Sbjct:   28 VVAVNDPFISVDYAAYMFKYDSTHGRYKGEVTTSGND-LVIDGHKIAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSK-TAPMFVVGVNEDKYN-GETIVSNASCTTNCLAPIAKIINDEFGIDEALMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKEATYDEIKAAVKKA 262          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.678e-43
Identity = 101/223 (45.29%), Postives = 132/223 (59.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            IVAIND    +  +++LKYDST G F   V+ V    + V+GK I+V + ++P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K   P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGI++G MTT H+ T  Q                   NI P+STGAAKAV  V+P  K       F    PNVSVVDL  ++ K
Sbjct:   14 IVAINDLLDAEYMAYMLKYDSTHGRFNGTVE-VKDGHLVVNGKTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVIPELKGKLTGMAFRVPTPNVSVVDLTVRLEK 234          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_BORHE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Borrelia hermsii GN=gap PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.678e-43
Identity = 106/228 (46.49%), Postives = 132/228 (57.89%), Query Frame = 3
Query:  144 KQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFV----DREGAGKHIQAGA--KKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSK----ATKRHCPFWANPNVSVVDLVPQVSKKPSQKK 794
            K  +HLLKYDST G++   V+    DG I VDG+ I++++ R+P NLPWG LG D+VIE TGVF     D+ G   H++AGA  KKV++TAP K +I T  +GV       D   +SNASCTTNCLAP  KVL + FGI +G MTT H+YT  Q                  +I PTSTGAAKAV LVLP  K     T    P    P  S+VDL  Q+ KK   K+
Sbjct:    6 KTLAHLLKYDSTFGVYNKKVE--SRDGAIVVDGREIKIIAERDPKNLPWGKLGXDVVIESTGVFSSATSDKGGYLDHVEAGAGAKKVILTAPAKDEIKTIXLGVXDHDINXDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNXQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPV---PTGSIVDLTVQLKKKDVTKE 228          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.003e-42
Identity = 103/223 (46.19%), Postives = 132/223 (59.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            IVAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI P+STGAAKAV  VLP          F    PNVSVVDL  ++ K
Sbjct:   29 IVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEK 249          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.003e-42
Identity = 103/223 (46.19%), Postives = 132/223 (59.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            IVAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI P+STGAAKAV  VLP          F    PNVSVVDL  ++ K
Sbjct:   29 IVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEK 249          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.003e-42
Identity = 103/223 (46.19%), Postives = 132/223 (59.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            IVAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI P+STGAAKAV  VLP          F    PNVSVVDL  ++ K
Sbjct:   29 IVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEK 249          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.003e-42
Identity = 103/223 (46.19%), Postives = 132/223 (59.19%), Query Frame = 3
Query:  114 IVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSK 776
            IVAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI P+STGAAKAV  VLP          F    PNVSVVDL  ++ K
Sbjct:   29 IVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEK 249          
BLAST of EY662284 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.310e-42
Identity = 101/227 (44.49%), Postives = 133/227 (58.59%), Query Frame = 3
Query:  114 IVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIGPTSTGAAKAVALVLPHSKATKRHCPFWA-NPNVSVVDLVPQVSKKPS 785
            IVA+ND     K A ++LKYDST G+F+  ++  G+D I V+GK ++  + R+P  +PW D G + ++E TGVF   E A  H++ GAK+V+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV++ KFGI++G MTT HSYT  Q                   NI P+STGAAKAV  V+P          F     NVSVVDL  ++ K  S
Sbjct:   29 IVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQVSGSDLI-VNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPS-ADAPMYVMGVNEKTYDGKAAVISNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTSNVSVVDLTCRLEKPAS 253          
The following BLAST results are available for this feature:
BLAST of EY662284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_XANFL5.879e-4345.02Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]
G3P_RALSO5.879e-4345.13Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P1_KLULA5.879e-4344.12Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_SERMA7.678e-4345.29Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_BORHE7.678e-4346.49Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P1_SHIFL1.003e-4246.19Glyceraldehyde-3-phosphate dehydrogenase A OS=Shig... [more]
G3P1_ECOLI1.003e-4246.19Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOL61.003e-4246.19Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO571.003e-4246.19Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_PODAN1.310e-4244.49Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662284 ID=EY662284; Name=EY662284; organism=Citrus sinensis; type=EST; length=927bp
CCTGGTCGCCTGATGTACCGGTCCGGAATTCTTTCTAAAAGAGGCGTCCG
GTTTGGTAGTGGCGGTAAGAACTTCTTGAGGTGCTGGCACGGCCGCAAGG
ACTCTCCACTTGAATCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGG
CCTCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGAT
GTTAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCA
GGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCA
TCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCG
GGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGG
CAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACA
AGCCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTT
GCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAAC
CATGACCACCACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTA
GCCACCGTGACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGGTCCA
ACATCAACTGGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCGCACTCCAA
GGCAACTAAACGGCATTGCCCTTTCTGGGCCAACCCAAACGTCTCCGTTG
TTGATCTTGTCCCTCAAGTGTCGAAAAAACCTTCGCAGAAGAAGTGGACC
CCGCCTTTCGAGAAAGCGCTGACATGAACTGAAAAGATACTCTCCCTGGG
CAACAAGCCCTCGCTTTCGGCGACTTCGGTGCTCTGATGTTCCCCACCCG
TGATCATCCCCCAACTTGGCAGGGAGA
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