EY744227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RS27A_ASPOF (40S ribosomal protein S27a OS=Asparagus officinalis PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24 Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1 Query: 331 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 489 LAVLQFYKVDD+GKV RLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQK Sbjct: 24 LAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQK 76
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RS27A_HORVU (40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.944e-22 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 1 Query: 331 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 492 LAVLQFYKVDD+ GKV RLRKECPNA+CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RS27A_ORYSJ (40S ribosomal protein S27a OS=Oryza sativa subsp. japonica GN=UBQ6 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 331 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 492 LAVLQFYKVDD+ GKV RLRKECPN +CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RS27A_MAIZE (40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 331 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 492 LAVLQFYKVDD+ GKV RLRKECPN ECGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: R27AA_ARATH (40S ribosomal protein S27a-1 OS=Arabidopsis thaliana GN=UBQ15 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 1 Query: 331 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 492 LAVLQFYKVD SGKVQRL+KECP+ CG GTFMA+HFDRHYCGKCG TYV++KA Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RS27A_DAUCA (40S ribosomal protein S27a (Fragment) OS=Daucus carota PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.431e-19 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1 Query: 331 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGK 462 LAVLQFYKVD+SGKVQRLRKECPN ECGAGTFMANHFDRHYCGK Sbjct: 24 LAVLQFYKVDESGKVQRLRKECPNGECGAGTFMANHFDRHYCGK 67
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.480e-19 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 40 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261 I VKTLTGK I +++E +DTID VK ++++KEGI P QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.852e-19 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 40 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261 I VKTLTGK I +++E +DTID +K ++++KEGI P QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.852e-19 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 40 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261 I VKTLTGK I +++E +DTID +K ++++KEGI P QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.852e-19 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 40 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261 I VKTLTGK I +++E +DTID +K ++++KEGI P QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of EY744227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744227 ID=EY744227; Name=EY744227; organism=Citrus sinensis; type=EST; length=913bpback to top |