EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CLOD6 (50S ribosomal protein L13 OS=Clostridium difficile (strain 630) GN=rplM PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.509e-25 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W + DA+G+ LGRLA+++ATV++GK KPT+ P+ D GD +V+NA+ I ++G+KL K Y +HTGY+G LKE + ++ M++ P E I AV MLP+N +F G+EH Sbjct: 14 KWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BART1 (50S ribosomal protein L13 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplM PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.509e-25 Identity = 56/119 (47.06%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ VLGRLA+ VA ++GK K T+ P+ DDGD IV+NA I +TG+K +K YYWHTGYIG +KERT ++ +E R P + KAV RM+PR ++ GS+HP Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKIALTGKKYTDKKYYWHTGYIGGIKERTARQLLEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHILO (50S ribosomal protein L13 OS=Rhizobium loti GN=rplM PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.583e-25 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLA+ +A ++GK KPT+ P+ DDGD IV+NA + TG+K +KVYYWHTG+ G +KERT ++ +E R P + KAV RM+PR ++ G+EHP Sbjct: 14 KWILIDAEGLVVGRLATVIANHLRGKHKPTFTPHVDDGDNVIVINADKVVFTGKKFTDKVYYWHTGHPGGIKERTARQLLEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_AGRRK (50S ribosomal protein L13 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rplM PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.583e-25 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA I +TG+K ++KVYYWHTGY G +KERT ++ +E R P + KAV RM+PR ++ GS HP Sbjct: 14 KWILIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINADKIVLTGKKYEDKVYYWHTGYAGGIKERTARQIIEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RUBXD (50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplM PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.985e-25 Identity = 51/118 (43.22%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G+ LGRLA++++ +++GK+KP Y P+ D GD +V+NA + VTGRK + KVY WHTGY G L+ER+ ++ + + P E +R+AV M+P+ I+ G EHP Sbjct: 14 KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKVYRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_EUBE2 (50S ribosomal protein L13 OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=rplM PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.817e-25 Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA LGRLASQVA V++GK+KPTY P D GD IV+NA + VTG+KL KVYY H+ Y+G LKE TLKE ME+ P + I AV MLP+ ++ G +H Sbjct: 14 KWYVVDAADYTLGRLASQVAAVLRGKNKPTYTPFLDCGDNVIVINADKVKVTGKKLDQKVYYSHSDYVGGLKETTLKEMMEKKPEKVIELAVKGMLPKGPLGRQMFTKLHVYAGPDH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHIE6 (50S ribosomal protein L13 OS=Rhizobium etli (strain CIAT 652) GN=rplM PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA + TG+K +KVYYWHTGY G +KERT ++ +E R P + KAV RM+PR ++ GS HP Sbjct: 14 KWVIIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINADKVVFTGKKYSDKVYYWHTGYAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLAD (50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplM PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLGRLA+Q++T+++GK KPT+ P+ D GD IV+NA+ I +TGRK + K+YY H+GY G LKE K + + P +R AV RMLP+N I+ G HP Sbjct: 15 WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPEQKIYYRHSGYPGGLKEIPYKMMLAKHPERILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SINMW (50S ribosomal protein L13 OS=Sinorhizobium medicae (strain WSM419) GN=rplM PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24 Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDAS 644 +W + DA+G V+GRLAS +A ++GK K TY P+ DDGD IV+NA+ +TG+K +K YYWHTGY G +KERT ++ +E R P I KAV RM+PR ++ GS HP P T+ D + Sbjct: 14 KWILIDAEGLVVGRLASLIANRLRGKHKATYTPHVDDGDNVIVINAEKAVLTGKKYTDKKYYWHTGYPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHPHEAQQP-TVLDVA 144
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHIL3 (50S ribosomal protein L13 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rplM PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA+ + TG+K +KVYYWHTGY G +KER+ ++ +E R P + KAV RM+PR ++ GS HP Sbjct: 14 KWVIIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINAEKVVFTGKKYSDKVYYWHTGYAGGIKERSARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |