EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SPICI (50S ribosomal protein L13 OS=Spiroplasma citri GN=rplM PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G VLGRLAS+VA +++GK+KP+Y P+ D GD I+LNA I ++G KLK K+YY H+ + G LK T K + + P + A+ MLP+N ++ G+EHP Sbjct: 15 KWYVIDAQGLVLGRLASKVAMILRGKNKPSYTPHVDCGDNVIILNADKINLSGNKLKGKMYYHHSQHPGGLKRTTAKNMLVKKPIYPVEHAIKGMLPKNKLGSKLFRNLFVYAGNEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOE4 (50S ribosomal protein L13 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rplM PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA Q A +++GK KPTYAP+ D GD +++NA+ + ++G KL+ K Y H+G+ G LK RT+ E ++R P + KA++ MLP+ ++ G HP P Sbjct: 15 WHVIDATDVVLGRLAVQAANLLRGKHKPTYAPHIDGGDFVVIINAEKVAISGNKLQGKNVYHHSGFPGGLKSRTVGEVLDRTPDRLVEKAIVGMLPKTKLGRAMSSKLKVYAGPNHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_METPB (50S ribosomal protein L13 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplM PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 58/119 (48.74%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G V+GRLAS VA ++GK K Y P+ D GD IV+NA + TGRK KVYY HTGY G +KER+ K +E R P + KAV RMLPR ++ GSEHP Sbjct: 14 KWVVIDAEGLVVGRLASIVAMRLRGKHKAAYTPHVDCGDHVIVINADKVKFTGRKYDQKVYYHHTGYPGGIKERSAKFILEGRFPERVVEKAVERMLPRGPLFRQILGHLRVYKGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_FRATF (50S ribosomal protein L13 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rplM PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W + DA + LGRLA++VA +++GK+KP Y P+ D GD +++NA+ I VTG K K K YY HTGYIG +K + ++ + P AI KAV MLPR ++ G HP P Sbjct: 15 WLLIDATDKTLGRLATEVAMILRGKNKPEYTPHMDTGDYVVIVNAEKIAVTGNKRKAKTYYHHTGYIGGIKSVSFEKLIATHPERAIEKAVRGMLPRTPLGRTMFKKLKVYAGEAHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ALCBS (50S ribosomal protein L13 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplM PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA G+ LGRLA++VA+ ++GK KP + P+ D GD +V+NA + VTG+K +K+YY HTGY G LKE P I KA+ MLPRN ++ G+EHP P Sbjct: 15 WYVVDASGKTLGRLATEVASRLRGKHKPEFTPHVDTGDYIVVINADKVAVTGKKASDKMYYRHTGYPGGLKEANFATLQAEKPEMIIEKAIKGMLPRNPLGRAMFRKLKVYAGTEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PELTS (50S ribosomal protein L13 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplM PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.780e-22 Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 237 NLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +++ +W V DA+G+VLGRLA++ A +++GK KP + P+ D GD IV+NA+ + +TG+KL++K Y H+GY G LK ++ M+ P A+ KA++ MLP N ++ G EHP P Sbjct: 10 DIKNRKWYVLDAEGKVLGRLAAEAARILRGKHKPDFTPHVDTGDHVIVINAEKVVLTGKKLRDKKYIRHSGYPGGLKVMNYEKLMKTRPELAVEKAIVGMLPHNRLGSRMAKKLKVYRGPEHPHQAQKP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCUA (50S ribosomal protein L13 OS=Mycobacterium ulcerans (strain Agy99) GN=rplM PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.780e-22 Identity = 51/123 (41.46%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++ KL+NK Y H+GY G L++R++ E ME+ P + KA++ MLP+N ++ G HP P Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISNEKLRNKRAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQSKLRVYAGPGHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_METEP (50S ribosomal protein L13 OS=Methylobacterium extorquens (strain PA1) GN=rplM PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.780e-22 Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G V+GRLAS VA ++GK KP Y P+ D GD IV+NA + TGRK KVYY HTGY G +KER+ K +E R P + KAV RMLPR ++ G+ HP Sbjct: 14 KWVVIDAEGLVVGRLASIVAMRLRGKHKPAYTPHVDCGDHVIVINADKVKFTGRKYDQKVYYHHTGYPGGIKERSAKFILEGRFPERVVEKAVERMLPRGPLFRQILGHLRVYKGAAHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_METC4 (50S ribosomal protein L13 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplM PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.780e-22 Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G V+GRLAS VA ++GK KP Y P+ D GD IV+NA + TGRK KVYY HTGY G +KER+ K +E R P + KAV RMLPR ++ G+ HP Sbjct: 14 KWVVIDAEGLVVGRLASIVAMRLRGKHKPAYTPHVDCGDHVIVINADKVKFTGRKYDQKVYYHHTGYPGGIKERSAKFILEGRFPERVVEKAVERMLPRGPLFRQILGHLRVYKGAAHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_KINRD (50S ribosomal protein L13 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rplM PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.780e-22 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 RW V DA+ VLGRLASQ A +++GK K TYAP+ D GD I++NA + +TG K KV Y H+GY G LK + + +E++P +A+ KA+ M+P+N ++ G+EHP Sbjct: 14 RWLVIDAEDVVLGRLASQTAILLRGKHKATYAPHVDGGDYVIIVNAAKVALTGSKRDQKVAYRHSGYPGGLKATSYVDLLEQNPEKAVEKAIRGMIPKNSLGRQVLSKLKVYAGAEHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |