EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCS5 (50S ribosomal protein L13 OS=Mycoplasma synoviae (strain 53) GN=rplM PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA+ QVLGRLAS VA+V++GK KPT+ PN D GD I++NA+ + +TG+K KNKVYY H+GY G LK RT ++ E PT + KA+ M+P ++ G EH Sbjct: 15 KWFVVDAENQVLGRLASLVASVLRGKTKPTFTPNADMGDNVIIINAEKVKLTGKKEKNKVYYSHSGYPGGLKARTAEKLREEKPTALLEKAISGMIPHTKLGNQQRKNLYVYAGPEH 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BARHE (50S ribosomal protein L13 OS=Bartonella henselae GN=rplM PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ VLGRLA+ VA ++GK K T+ P+ DDGD IV+NA I +TG+K +K YYWHTGYIG +K+RT ++ +E R P + KAV RM+PR ++ GS+HP Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTGKKYTDKKYYWHTGYIGGIKKRTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOPT (50S ribosomal protein L13 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplM PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA G V+GRLA+ VA ++GK PTY P+ D GD I++NA + +TGRK NKVYY HTG+IG +KER+ K +E R P + KA+ RM+PR ++PG+EHP Sbjct: 14 KWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRDNKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIPRGPLGRVQMGNLRVYPGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOPA (50S ribosomal protein L13 OS=Rhodopseudomonas palustris GN=rplM PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA G V+GRLA+ VA ++GK PTY P+ D GD I++NA + +TGRK NKVYY HTG+IG +KER+ K +E R P + KA+ RM+PR ++PG+EHP Sbjct: 14 KWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRDNKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIPRGPLGRVQMGNLRVYPGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHIME (50S ribosomal protein L13 OS=Rhizobium meliloti GN=rplM PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K TY P+ DDGD IV+NA+ +TG+K +K YYWHTGY G +KERT ++ +E R P I KAV RM+PR ++ GS HP Sbjct: 14 KWILIDAEGLVVGRLASLIANRLRGKHKATYTPHVDDGDNVIVINAEKAVLTGKKYTDKKYYWHTGYPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_AGRT5 (50S ribosomal protein L13 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rplM PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDASS 647 +W + DA+G V+GRLA+ VAT ++GK K T+ P+ DDGD IV+NA+ + TG+K +K YYWHTG+ G +KERT ++ +E R P + KA+ RM+PR ++ GS HP P T+ D ++ Sbjct: 14 KWIIIDAEGLVVGRLATIVATRLRGKHKATFTPHVDDGDNVIVINAEKVAFTGKKYSDKKYYWHTGHPGGIKERTARQIIEGRFPERVVEKAIERMIPRGPLGRRQMKNLRVYAGSNHPHEAQQP-TVLDVAA 145
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHILW (50S ribosomal protein L13 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rplM PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 54/119 (45.38%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA + TG+K +KVYYWHTG+ G +KERT ++ +E R P + KAV RM+PR ++ GS HP Sbjct: 14 KWVIIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINADKVVFTGKKYSDKVYYWHTGFAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_GEMAT (50S ribosomal protein L13 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=rplM PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 56/125 (44.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN-XXXXXXXXXXXIFPGSEHPFWRPAP 623 RW V DA+G VLGRLAS+VA +++GK KP Y P+ D GD IV+NA + VTGRK + K Y+ HTGY+GH K + + P I KAV MLP+ +F G+EHP +P Sbjct: 14 RWYVVDAEGMVLGRLASEVAKIIRGKHKPMYTPHMDTGDFVIVINASKVQVTGRKAEQKTYFSHTGYMGHEKHTPFASVLAKHPERVIEKAVYGMLPKTALGRQVLRRKLRVFAGAEHPHIAQSP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLSY (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplM PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 54/117 (46.15%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLGRLA+Q++T+++GK KPT+ P+ D GD IV+NA+ I +TGRK K+YY HTGY G +K K + + P +R AV RMLP+N I+ G HP Sbjct: 15 WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIYYRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLAA (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplM PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 54/117 (46.15%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLGRLA+Q++T+++GK KPT+ P+ D GD IV+NA+ I +TGRK K+YY HTGY G +K K + + P +R AV RMLP+N I+ G HP Sbjct: 15 WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIYYRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |