EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PSEA7 (50S ribosomal protein L13 OS=Pseudomonas aeruginosa (strain PA7) GN=rplM PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA GQ LGRLA+++A ++GK KP Y P+ D GD +V+NA+ + VTG K +K+YY H+G+ G +K ++ + + P I AV MLP+N ++ G+ HP P Sbjct: 15 WFVVDAAGQTLGRLATEIARRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKTTDKMYYHHSGFPGGIKSINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYKGANHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_NEIG1 (50S ribosomal protein L13 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rplM PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA+ +VLGR+A++VA+ ++GK KP Y P+ D GD IV+NA + VTG K ++K Y+ H+G+ G + ERT +E ++ P A+ +AV MLP+ ++ G+EH Sbjct: 15 WFVIDAQDKVLGRVATEVASRLRGKHKPEYTPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQDQFPGRALEQAVKGMLPKGPLGYAMIKKLKVYAGAEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_COREF (50S ribosomal protein L13 OS=Corynebacterium efficiens GN=rplM PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*T 629 +W V DA VLGRLA+ A +++GK KP +APN D GD I++NA + +T K ++ Y H+GY G LK TL +E P + +++ M+P N +F GSEHP+ P T Sbjct: 14 KWYVIDATDVVLGRLATHAADLLRGKGKPLFAPNVDCGDHVIIINADKVAITSNKRDREMRYRHSGYPGGLKSMTLGRSLELHPERVLEESITGMMPHNKLTAASVKKLHVFAGSEHPYAAQKPET 139
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CELJU (50S ribosomal protein L13 OS=Cellvibrio japonicus (strain Ueda107) GN=rplM PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DA G+ LGRL++++A+ ++GK KP + P+ D GD IV+NA + VTG K +KVYY HT + G +K T + +E+ P I+ AV MLP+ ++ G+EHP Sbjct: 15 WFIVDAAGKTLGRLSAEIASRLRGKHKPEFTPHVDTGDYIIVINAAKVRVTGNKATDKVYYHHTNFAGGIKSITFDKLIEKAPERTIQTAVKGMLPKGPLGYAMFKKLKVYAGAEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ANATD (50S ribosomal protein L13 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplM PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20 Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA G+ LGRLA+++A +++GK KP + PN D GD IV+NA+ + +TG+KL Y +HT Y G LK + +E+ P +AI AV MLP+N ++ G HP Sbjct: 14 KWYVIDATGKPLGRLAAKIAVILRGKHKPQFTPNVDTGDYVIVINAEKVVLTGKKLDKDGYRYHTKYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNRLRDRFMRKLKVYRGPNHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROM2 (50S ribosomal protein L13 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DAK + LGRLA+++AT+++GK+KPT+ P+ D GD IV+NA+ + VTG+K K+Y H+G G +K + ER P I +AV MLP N ++ G++HP Sbjct: 16 WFLVDAKNKTLGRLATEIATLLRGKNKPTFTPHLDTGDFVIVVNAEKVEVTGKKASQKLYRRHSGRPGGMKIEKFESLKERIPERIIEQAVKGMLPHNSLGRQQFKKLKVYKGADHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PELLD (50S ribosomal protein L13 OS=Pelodictyon luteolum (strain DSM 273) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 45/124 (36.29%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+GQVLGR+A+++A V++GK KP + P+ D GD +V NA+ + ++G K K Y+ H+ Y G ++ ++K+ + + P + I AV MLP N ++ G++HP AP Sbjct: 20 KWYVIDAEGQVLGRMAAEIARVLRGKHKPQFTPHVDTGDFIVVTNAEKVALSGNKENLKTYFSHSHYPGGVRVDSVKDLLRKKPEKIIEHAVWGMLPHNNLGRQLFRKLKVYAGTQHPHEAQAP 143
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DEHE1 (50S ribosomal protein L13 OS=Dehalococcoides ethenogenes (strain 195) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLG +A++ A + GK KP + N D GD +++NAK + VTG KL K+YY H+G+ G ++ L + ++ P I AV M+PRN ++ G EHP Sbjct: 15 WHVIDASGRVLGEVAAEAAKYLMGKHKPMFCRNLDCGDYVVIINAKKVTVTGNKLDQKIYYRHSGFPGGFRQEKLGDLLKTKPLFVIEHAVKGMIPRNTLGAQILAKLKVYEGEEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CYAP4 (50S ribosomal protein L13 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA Q LGRLA+Q+A +++GK KP Y P+ D GD IV+NA+ + VTG+K K+Y H+G G +K T + R P I AV MLP+N ++ G +HP P Sbjct: 15 KWYVVDATEQHLGRLATQIAMILRGKTKPIYTPSMDTGDFVIVVNAEKVAVTGKKRTQKIYRRHSGRPGGMKTETFAKLQSRLPERIIEHAVKGMLPKNTLGRNLFTKLKVYAGPDHPHQAQKP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CALS8 (50S ribosomal protein L13 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA G+ LGRLA+++A +++GK KP + PN D GD IV+NA+ + +TG+KL Y +HT Y G LK + +E+ P +AI AV MLP+N ++ G HP Sbjct: 14 KWYVIDATGKPLGRLAAKIAVILRGKHKPQFTPNVDTGDYVIVVNAEKVVLTGKKLDKDGYRYHTKYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNRLRDRFMRKLKVYRGPNHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |