EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BIFLO (50S ribosomal protein L13 OS=Bifidobacterium longum GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA+Q A +++GK+KPTYAP+ D G+ I++NA I +TG K+ K Y H+G G L+ + E +E++P I+ AV MLP+N IF G+EHP Sbjct: 15 WYVIDATDVVLGRLATQAAILLRGKNKPTYAPHADSGNHVIIINADKIALTGNKM-GKELYSHSGRPGGLRRDSYAELLEKNPERIIKNAVKGMLPKNRLAKVQLDRLRIFRGAEHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BIFLI (50S ribosomal protein L13 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA+Q A +++GK+KPTYAP+ D G+ I++NA I +TG K+ K Y H+G G L+ + E +E++P I+ AV MLP+N +F G+EHP Sbjct: 15 WYVIDATDVVLGRLATQAAVLLRGKNKPTYAPHADSGNHVIIINADKIALTGNKM-GKELYSHSGRPGGLRRDSYAELLEKNPERIIKNAVKGMLPKNRLAKVQLDRLRVFRGAEHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BIFLD (50S ribosomal protein L13 OS=Bifidobacterium longum (strain DJO10A) GN=rplM PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA+Q A +++GK+KPTYAP+ D G+ I++NA I +TG K+ K Y H+G G L+ + E +E++P I+ AV MLP+N IF G+EHP Sbjct: 15 WYVIDATDVVLGRLATQAAILLRGKNKPTYAPHADSGNHVIIINADKIALTGNKM-GKELYSHSGRPGGLRRDSYAELLEKNPERIIKNAVKGMLPKNRLAKVQLDRLRIFRGAEHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SILPO (50S ribosomal protein L13 OS=Silicibacter pomeroyi GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W + DA+G VLGRLAS VA ++GK K ++ P+ D GD IV+NA + +TG+K + + +YWHTG+ G +K RT ++ +E P + +AV RMLP N I+ G+EHP AP Sbjct: 14 KWILIDAEGVVLGRLASIVAMRLRGKHKASFTPHMDMGDNVIVINADKVQITGKK-REEHFYWHTGHPGGIKSRTKQQILEGAHPERVVYQAVKRMLPGNRLSRQQMTNLRIYAGTEHPHEAQAP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROMT (50S ribosomal protein L13 OS=Prochlorococcus marinus (strain NATL2A) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ Q LGRLA++VA+V++GK KP + P+ D GD IV+NA+ I VTG+K K+Y H+G G +K T K R P + KA+ MLP ++ GS+HP Sbjct: 15 QWFLVDAENQTLGRLATEVASVLRGKTKPNFTPHLDTGDFVIVVNAEKIKVTGKKSDQKLYRRHSGRPGGMKVETFKALQSRIPERIVEKAIKGMLPHTRLGRQLFTKLKVYKGSDHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROMP (50S ribosomal protein L13 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DAK + LGRL++++A V++GK+KPT+ P+ D GD IV+NA+ + VTG+K K+Y H+G G +K + ER P I +AV MLP N ++ GS+HP Sbjct: 16 WFLVDAKDKTLGRLSTEIAAVLRGKNKPTFTPHLDTGDFVIVVNAEKVEVTGKKASQKLYRRHSGRPGGMKVEKFESLQERIPERIIEQAVKGMLPHNSLGRQQFKKLKVYKGSDHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROMM (50S ribosomal protein L13 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIR 635 +W + DA+ Q LGRLA++VA+V++GK+KP++ P+ D GD +V+NA I V+G K K+Y H+G G +K T + +R P + KA+ MLP N ++ G EHP P T++ Sbjct: 15 QWFLVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRRHSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNALGRQLFRKLKVYRGPEHPHSAQRPQTLQ 142
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROM3 (50S ribosomal protein L13 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIR 635 +W + DA+ Q LGRLA++VA+V++GK+KP++ P+ D GD +V+NA I V+G K K+Y H+G G +K T + +R P + KA+ MLP N ++ G EHP P T++ Sbjct: 15 QWFLVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRRHSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNALGRQLFRKLKVYRGPEHPHSAQRPQTLQ 142
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PROM1 (50S ribosomal protein L13 OS=Prochlorococcus marinus (strain NATL1A) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ Q LGRLA++VA+V++GK KP + P+ D GD IV+NA+ I VTG+K K+Y H+G G +K T K R P + KA+ MLP ++ GS+HP Sbjct: 15 QWFLVDAENQTLGRLATEVASVLRGKTKPNFTPHLDTGDFVIVVNAEKIKVTGKKSDQKLYRRHSGRPGGMKVETFKALQSRIPERIVEKAIKGMLPHTRLGRQLFTKLKVYKGSDHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DEHSC (50S ribosomal protein L13 OS=Dehalococcoides sp. (strain CBDB1) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLG +A++ A + GK KP + N D GD +++NAK I VTG KL K+YY H+G+ G ++ L + ++ P I AV M+PRN ++ G+EHP Sbjct: 15 WHVIDASGRVLGEVAAEAAKYLMGKHKPMFCRNLDCGDYVVIVNAKKITVTGNKLDQKMYYRHSGFPGGFRQEKLGDLLKTKPLFVIEHAVKGMIPRNTLGAQILAKLKVYEGAEHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |